Glutathione transferase (GT; EC 2.5.1.18) mRNA levels were measured in human liver samples by using mouse and human cDNA clones that encode class-mu and class-alpha GT. Although all the RNA samples examined contained class-alpha GT mRNA, class-mu GT mRNA was found only in individuals whose peripheral leukocytes expressed GT activity on the substrate trans-stilbene oxide. The mouse class-mu cDNA clone was used to identify a human class-mu GT cDNA clone, AGTH411. The amino acid sequence of the GT encoded by AGTH411 is identical with the 23 residues determined for the human liver GT-I isoenzyme and shares 76-81% identity with mouse and rat class-mu GT isoenzymes. The mouse and human class-mu GT cDNA inserts hybridize with multiple BamHI and EcoRI restriction fragments in the human genome. One of these hybridizing fragments is missing in the DNA of individuals who lack GT activity on trans-stilbene oxide. Hybridizations with nonoverlapping subfragments of AGTH411 suggest that there are at least three class-mu genes in the human genome. One of these genes appears to be deleted in individuals lacking GT activity on trans-stilbene oxide.The glutathione transferases (GTs, EC 2.5.1.18) are a family of catalytic and binding proteins that detoxify chemical carcinogens (1,2). Multiple GT isoenzymes have been isolated from human, rat, and mouse tissues (2). Protein sequence data and antibody cross-reactivity have been used to group these isoenzymes into three distinct classes that have been termed alpha, mu, and pi (3). Members of the same class share 75-95% amino acid sequence identity, whereas members of different classes share 25-30% sequence identity. Livers of all adult humans express several class-alpha GTs; in addition, the livers of about one-half of the adult population contain a class-mu isoenzyme, p (3,4). The GT-p. isoenzyme has been shown to be similar or identical to a GT activity against trans-stilbene oxide (GT-tSBO) that is measured in peripheral leukocytes (5). Studies on several hundred subjects have shown a large variation in GT-tSBO activity among individuals; -50% of the population lacks GT-tSBO activity (6). Individuals lacking GT-tSBO are more likely to contract lung cancer (7).Three genetic loci encoding human liver GT isoenzymes have been characterized: GSTJ, GST2,. GSTJ corresponds to the class-mu isoenzyme, GST2 corresponds to the class-alpha isoenzyme, and GST3 encodes the placental class-pi GT (3, 11). The GSTI locus is polymorphic in human populations and displays three alleles: GSTJ-O (null), GSTI-1, and GSTJ-2 (8-10, 12). Studies on Indian,Chinese, and Caucasian populations have shown that the fraction of the population with two null GSTJ alleles ranges from 31% to 66% (8,12). The polymorphism at the GSTI locus is similar to the variation in GT-tSBO activity and is consistent with the observation that the GSTI locus encodes the GT-p. isoenzyme (J.S., unpublished data) that is responsible for GT-tSBO activity (5). Three additional human loci have been described: GST4, GST5, and GST6 (1...