Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa

Hyde, Kevin D.; Tennakoon, Danushka S.; Jeewon, Rajesh; Bhat, D. Jayarama; Maharachchikumbura, Sajeewa S. N.; Rossi, Walter; Leonardi, Marco; Lee, Hyang Burm; Mun, Hye Yeon; Houbraken, Jos; Nguyen, Thuong T. T.; Jeon, Sun Jeong; Frisvad, Jens Christian; Wanasinghe, Dhanushka N.; Lücking, Robert; Aptroot, André; Cáceres, Marcela E. S.; Karunarathna, Samantha C.; Hongsanan, Sinang; Phookamsak, Rungtiwa; Silva, Nimali I. de; Thambugala, Kasun M.; Jayawardena, Ruvishika S.; Senanayake, Indunil C.; Boonmee, Saranyaphat; Chen, Jie; Luo, Zong Long; Phukhamsakda, Chayanard; Pereira, Olinto Liparini; Abreu, Vanessa Pereira de; Rosado, André Wilson Campos; Buyck, Bart; Randrianjohany, Émile; Hofstetter, Valérie; Gibertoni, Tatiana Baptista; Soares, Anna Elis Paz; Plautz, Helio Longoni; Sotão, Helen Maria Pontes; Xavier, William Kalhy Silva; Bezerra, Jadson Diogo Pereira; Oliveira, Thays Gabrielle Lins de; Souza-Motta, Cristina Maria de; Magalhães, Oliane Maria Correia; Bundhun, Digvijayini; Harishchandra, Dulanjalee; Manawasinghe, Ishara S.; Dong, Wei; Zhang, Sheng Nan; Bao, Dan Feng; Samarakoon, Milan C.; Pem, Dhandevi; Karunarathna, Anuruddha; Lin, Chuan Gen; Yang, Jing; Perera, Rekhani H.; Kumar, Vinit; Huang, Shi Ke; Dayarathne, Monika C.; Ekanayaka, Anusha H.; Jayasiri, Subashini C.; Xiao, Yuan-Pin; Konta, Sirinapa; Niskanen, Tuula; Liimatainen, Kare; Dai, Yu Cheng; Ji, Xiao Hong; Tian, Xue Mei; Mešić, Armin; Singh, Sanjay K.; Phutthacharoen, Kunthida; Cai, Lei; Sorvongxay, Touny; Thiyagaraja, Vinodhini; Norphanphoun, Chada; Chaiwan, Napalai; Lu, Yong Zhong; Jiang, Hong; Zhang, Jin Feng; Abeywickrama, Pranami D.; Aluthmuhandiram, Janith V. S.; Brahmanage, Rashika S.; Zeng, Ming; Chethana, Thilini; Wei, De-Ping; Réblová, Martina; Fournier, Jacques; Nekvindová, Jana; Barbosa, Renan do Nascimento; Santos, José Ewerton Felinto dos; Oliveira, Neiva Tinti de; Li, Guo Jie; Ertz, Damien; Shang, Qiu Ju; Phillips, Alan J. L.; Kuo, Chang Hsin; Camporesi, Erio; Bulgakov, Timur S.; Lumyong, Saisamorn; Jones, E. B. Gareth; Chomnunti, Putarak; Gentekaki, Eleni; Bungartz, Frank; Zeng, Xiang; Fryar, Sally C.; Tkalčec, Zdenko; Liang, Junmin; Li, Guangshuo; Wen, Ting Chi; Singh, Paras Nath; Gafforov, Yusufjon; Promputtha, Itthayakorn; Yasanthika, Erandi; Goonasekara, Ishani D.; Zhao, Rui; Zhao, Qi; Kirk, Paul M.; Liu, Jian‐Kui; Yan, Jiye; Mortimer, Peter E.; Xu, Jianchu; Doilom, Mingkwan

doi:10.1007/s13225-019-00429-2

Cited by 157 publications

(156 citation statements)

References 462 publications

(714 reference statements)

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“…Members of Penicillium are widespread in food products, soil, plant-decaying materials, animals and indoor environments ( Visagie et al, 2016 ; Diao et al, 2018 ; Heo et al, 2019 ). Many recent studies reported Penicillium strains belonging to the section Lanata-Divaricata ( Visagie et al, 2016 ; Lorenzini et al, 2019 ; Hyde et al, 2019a ; Guevara-Suarez et al, 2020 ). Delimiting species in this section based only on morphological characteristics is difficult; accordingly, ITS, BenA , CaM and RPB2 are used to delimit species boundaries ( Visagie et al, 2016 ).…”

Section: Resultsmentioning

confidence: 99%

Screening of Phosphate-Solubilizing Fungi From Air and Soil in Yunnan, China: Four Novel Species in Aspergillus, Gongronella, Penicillium, and Talaromyces

et al. 2020

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Phosphate-solubilizing fungi (PSF) play an important role in increasing the bioavailability of phosphorus in soils for plants. Thirteen fungal strains, one collected from air and 12 from soil, were screened and described here in detail. These fungal strains were tested for their ability to solubilize tricalcium phosphate (TCP) on both solid and liquid Pikovskaya (PVK) media in vitro . The airborne fungal strain KUMCC 18-0196 ( Aspergillus hydei sp. nov.) showed the most significant phosphate solubilizing activity on a solid PVK medium with the solubilization index (SI) (2.58 ± 0.04 cm) and the highest solubilized phosphates (1523.33 ± 47.87 μg/mL) on a liquid PVK medium. To the best of our knowledge, A. hydei sp. nov. is the first phosphate-solubilizing fungus reported from air. We also provide the identification especially for Aspergillus , Penicillium and Talaromyces , generally reported as PSF. It is important to not only screen for PSF but also identify species properly so that researchers have a clearer taxonomic picture for identifying potential taxa for future plant growth-promoting applications. Herein, A. hydei (section Nigri ), Gongronella hydei , Penicillium soli (section Lanata-Divaricata ) and Talaromyces yunnanensis (section Talaromyces ) are fully described and introduced as new to science. These four new species are identified based on both morphological characteristics and multigene phylogenetic analyses, including the genealogical concordance phylogenetic species recognition method where necessary. Penicillium austrosinense is considered to be a synonym of P. guaibinense.

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Section: Resultsmentioning

confidence: 99%

Screening of Phosphate-Solubilizing Fungi From Air and Soil in Yunnan, China: Four Novel Species in Aspergillus, Gongronella, Penicillium, and Talaromyces

et al. 2020

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“…Overall, these results support the conclusions based on morphology that all Bactrocera are infected by a single species of Stigmatomyces , but neither can rule out cryptic speciation. The closest sister species in the phylogeny is S. gregarius W. Rossi, isolated from a stalk‐eyed fly (Diopsidae), a host which is distantly related to Bactrocera (Tephritidae), but the current phylogenetic coverage includes only a fraction of the Stigmatomyces diversity (Hyde et al., 2019) and may lack more closely related congeners.…”

Section: Resultsmentioning

confidence: 99%

The paradoxical rarity of a fruit fly fungus attacking a broad range of hosts

Doorenweerd

Sievert

Rossi

et al. 2020

Ecology and Evolution

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Understanding the factors that determine the realized and potential distribution of a species requires knowledge of abiotic, physiological, limitations as well as ecological interactions. Fungi of the order Laboulbeniales specialize on arthropods and are typically thought to be highly specialized on a single species or closely related group of species. Because infections are almost exclusively transmitted through direct contact between the hosts, the host ecology, to a large extent, determines the distribution and occurrence of the fungus. We examined ~20,000 fruit flies (Diptera: Dacinae) collected in Malaysia, Sulawesi, Australia, and the Solomon Islands between 2017 and 2019 for fungal infections and found 197 infected flies across eight different Bactrocera species. Morphology and 1,363 bps of small subunit (18S) DNA sequences both support that the infections are from a single polyphagous fungal species Stigmatomyces dacinus—a known ectoparasite of these fruit flies. This leads to the question: why is S. dacinus rare, when its hosts are widespread and abundant? In addition, the hosts are all Bactrocera, a genus with ~480 species, but 37 Bactrocera species found sympatric with the hosts were never infected. Host‐selection does not appear to be phylogenetically correlated. These results suggest a hidden complexity in how different, but closely related, host species vary in their susceptibility, which somehow limits the abundance and dispersal capability of the fungus.

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“…Phylogenetic analyses were performed from single gene (LSU dataset) as well as based on a combined LSU, SSU, TEF1-α, RPB2 and ITS sequence dataset. Sequences generated from this study were analyzed with other similar sequences obtained from GenBank and those derived from recent publications [32,10,19,9,5,6,7] (Table 1). The single gene alignment was performed by using MAFFT v. 7 [33] (http://mafft.cbrc.jp/alignment/server/) and manually aligned wherever necessary in MEGA version 7.0 [34].…”

Section: Sequence Alignment and Phylogenetic Analysesmentioning

confidence: 99%

“…However, there was little information regarding the phylogenetic relationships of Torula until the studies of Crous et al [8], Li et al [5] and Su et al [6,7]. To date, only 15 species have their DNA sequence data being analysed to reveal their phylogenetic placements in Torulaceae [18,19,9,5,6,7,20].…”

Section: Introductionmentioning

confidence: 99%

Multigene phylogeny and taxonomy of Dendryphion hydei and Torula hydei spp. nov. from herbaceous litter in northern Thailand

Jeewon

Mortimer

et al. 2020

PLoS ONE

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During our studies on asexual fungi colonizing herbaceous litter in northern Thailand, we discovered two new fungal species, viz. Dendryphion hydei and Torula hydei spp. nov. The latter are examined, and their morphological characters are described as well as their DNA sequences from ribosomal and protein coding genes are analysed to infer their phylogenetic relationships with extant fungi. Torula hydei is different from other similar Torula species in having tiny and catenate conidia. Dendryphion hydei can be distinguished from other similar Dendryphion species in having large conidiophores and subhyaline to pale olivaceous brown, 2-4(-5)-septate conidia. Multigene phylogenetic analyses of a combined LSU, SSU, TEF1-α, RPB2 and ITS DNA sequence dataset generated from maximum likelihood and Bayesian inference analyses indicate that T. hydei forms a distinct lineage and basal to T. fici. Dendryphion hydei forms a distinct lineage and basal to D. europaeum, D. comosum, D. aquaticum and D. fluminicola within Torulaceae (Pleosporales, Dothideomycetes).

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Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa

Cited by 157 publications

References 462 publications

Screening of Phosphate-Solubilizing Fungi From Air and Soil in Yunnan, China: Four Novel Species in Aspergillus, Gongronella, Penicillium, and Talaromyces

Screening of Phosphate-Solubilizing Fungi From Air and Soil in Yunnan, China: Four Novel Species in Aspergillus, Gongronella, Penicillium, and Talaromyces

The paradoxical rarity of a fruit fly fungus attacking a broad range of hosts

Multigene phylogeny and taxonomy of Dendryphion hydei and Torula hydei spp. nov. from herbaceous litter in northern Thailand

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