Functional Genomic analysis of Turnip mosaic virus infection in Arabidopsis thaliana

Abstract

All rights reserved. by ProQuest Information and Learning Company. TABLE OF CONTENTS CHAPTER 1. GENERAL INTRODUCTION 1.1. Significance and objectives 1.2. Literature review-the compatible interaction between potyviruses and plant host 1.3. Dissertation organization 15 1.4. References 16 CHAPTER 2. SPATIAL ANALYSIS OF ARABIDOPIS THALIANA GENE EXPRESSION IN RESPONSE TO TURNIP MOSAIC VIRUS INFECTION 2.1. Abstract 2.2. Introduction 23 2.3. Results 2.4. Discussion 34 2.5. Material and Methods 2.6. Acknowledgements 2.7. Supplemental materials 2.8. References 45 CHAPTER 3. DOWN-REGULATION OF CELL WALL GENES IN RESPONSE TO TURNIP MOSACI VIRUS INFECTION INVOVLED AN UNIQUE RNA SILENCING PATHWAY 3.1. Abstract 3.2. Introduction 78 3.3. Results 3.4. Discussion 85 3.5. Material and Methods 3.6. Acknowledgements 3.7. References 90 CHAPTER 4. INDUCTION OF NECESSARY HOST FACTORS, THE RIBOSOMAL PROTEINS, BY PLANT VIRUSES 4.1. Abstract 4.2. Introduction 100 4.3. Results 4.4. Discussion 110 4.5. Material and Methods 4.6. Acknowledgements 4.7. References iii CHAPTER 5. CONCLUSIONS AND FUTURE WORK 5.1 General conclusion 5.2 Future directions 5.3. References ACKNOWLEDGEMENTS 1 CHAPTER 1

Identification of whitefly (Bemisia tabaci) proteins interacting with Tomato leaf curl Bangalore virus coat protein gene using Y2H system

“…A '40S ribosomal protein S20' also interacted with the CP of ToLCV, which is involved in subcellular localization, protein activity regulation, protein with binding function or cofactor requirement and transcription (Zhou et al 2015;Lost and Jain 2019). Similar interaction was reported in Arabidopsis thaliana with Turnip mosaic virus infection (Yang 2007). Some disease manipulative proteins such as 'zinc finger X-linked protein ZXDA-like', a DNA binding protein, which are able to target specifically and manipulate disease-causing genes (Cassandri et al 2017) was also found.…”