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<p>The neuronal ceroid lipofuscinoses (NCLs) commonly referred to as Batten disease are a family of rare lysosomal
storage disorders (LSDs). The most common form of NCL occurs in children harboring a mutation in the CLN3
gene. This form is lethal with no existing cure or treatment beyond symptomatic relief. The pathophysiology of
CLN3 disease is complex and poorly understood, with the current in vivo and in vitro models failing to identify
pharmacological targets for therapeutic intervention. This study reports the characterization of the first CLN3
patient-specific induced pluripotent stem cell (iPSC)-derived model of the blood-brain barrier (BBB) and adds to
the few available iPSC-derived neuron models of the disease. Upon differentiation, hallmarks of CLN3 disease
were displayed including lipofuscin and subunit C of mitochondrial ATP synthase accumulation, mitochondrial
dysfunction and aberrant lysosomal pH. Small molecules were identified that cleared subunit C accumulation by
the mTOR-independent modulation of autophagy, conferred protective effects through induction of Bcl-2 and
rescued mitochondrial dysfunction.
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