In order to increase shrimp production and minimize detrimental environmental impacts of aquaculture, the maintenance and regulation of the growth and composition of phytoplankton communities and nutritional balance are critical. Silicon (Si) is an essential nutrient for diatoms and other types of microorganisms, but the information about the Si impact on their growth is extremely scarce. Monosilicic and polysilicic acids were tested in several shrimp cultivation systems in Jiangsu Province, China. In pond waters, the concentrations of monosilicic and polysilicic acids sharply reduced by 36-95% and 35-75%, accordingly, as compared with those in supply water sources. The microbial cell abundance was strongly dependent on monosilicic acid, while the correlation with polysilicic acid was absent. In laboratory experiments, monosilicic acid added to pond water or probiotic solution at 1 and 2 mM Si had a signi cant positive effect on cell abundance. Over three days, the concentrations of monosilicic acid decreased by 81 to 91% in pond water and by 11 to 24% in probiotic solution. In probiotic solutions, the degree of polymerization of silicic acid was more intensive than that in shrimp pond waters. The data obtained demonstrates the importance of systematic studies related to the functions of Si in shrimp aquaculture.