Abstract. We report a new type of refractive index-based biosensor using a fiber loop ringdown evanescent field (FLRD-EF) sensing scheme, in which the sensing signal is a time constant and detection sensitivity is enhanced by the multipass nature of the ringdown technique. Bulk index-based detections of three different single strand DNAs and one type of bacteria are demonstrated for the FLRD-EF sensors that utilize a partially-etched single mode fiber as the sensor head. Stepwise coating of the sensor head with poly-L-lysine and a probe DNA has enabled surface index-based label-free target DNA sensing. We expect an array of FLRD-EF biosensors to be created, which are superior to counterparts in terms of simplicity, low cost, and high sensitivity. C FLRD as a uniform time-domain sensing scheme has been explored to develop a variety of physical and chemical fiber optics sensors, such as pressure, strain, temperature, refractive index, microfluids, and volatile organic compounds; the details can been read in recent reviews. 3,4 In FLRD, the sensing signal is a time constant; the detection sensitivity is proportionally enhanced by the number of round-trips a laser pulse travels in the fiber loop which can be up to a few kilometers long. Many sensing mechanisms, such as direct gas absorption, microbending-induced deformation, fiber Bragg grating (FBG)-and long period grating (LPG)-based wavelength shift, and evanescent field (EF) absorption and scattering, can be directly adopted into the uniform sensing platform for the development of different sensors. This technique has great potential for biosensor development, yet it has not been much explored, except for one early publication in which a single mammalian cancer cell is detected based on the scattering effect of the localized EF around a 10-mm long single mode fiber taper.
5In this work, we demonstrate bulk index-based deoxyribonucleic acid (DNA) and bacteria sensing and surface index-based label-free DNA sensing using the FLRD sensing scheme combined with the EF sensing mechanism. To the best of our knowledge, this work presents the first DNA and bacteria sensors using the FLRD technique. Without utilizing additional optical components, such as an FBG or LPG to fabricate the sensor head, as reported in recent studies, 6-10 our sensor design demonstrates comparable or better performance while featuring significantly lower cost, simplified design and configuration, and potentially higher detection sensitivity. Figure 1(a) shows the fiber loop ringdown system consisting of a section of fused-silica single mode fiber (SMF 28, Corning, Inc.), two identical 2×1 fiber couplers (Opneti Communication), a temperature-controlled continuous wave diode laser with output power of 30 mW when operating at 100 mA (NEL America), an InGaAs photodetector (Thorlabs, PDA50B), and an electronic control. Cladding and core diameters of the single mode fiber are 125 and 8 μm, respectively. The total optical loss, including the absorption loss, fiber connectors' insertion losses, and fi...