2021
DOI: 10.1038/s41598-021-93830-4
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Fast and scalable likelihood maximization for Exponential Random Graph Models with local constraints

Abstract: Exponential Random Graph Models (ERGMs) have gained increasing popularity over the years. Rooted into statistical physics, the ERGMs framework has been successfully employed for reconstructing networks, detecting statistically significant patterns in graphs, counting networked configurations with given properties. From a technical point of view, the ERGMs workflow is defined by two subsequent optimization steps: the first one concerns the maximization of Shannon entropy and leads to identify the functional for… Show more

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Cited by 30 publications
(39 citation statements)
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References 42 publications
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“…We use the implementation proposed in [ 40 ] and the relative code of the package NEMtropy 7 for the computation of the randomization and of the monopartite projection. In the following, the nodes corresponding to one layer will be called with the letter as they correspond to the rows layer in a biadjacency matrix representation of the network, and the opposite layer will be indexed as as they correspond to columns.…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…We use the implementation proposed in [ 40 ] and the relative code of the package NEMtropy 7 for the computation of the randomization and of the monopartite projection. In the following, the nodes corresponding to one layer will be called with the letter as they correspond to the rows layer in a biadjacency matrix representation of the network, and the opposite layer will be indexed as as they correspond to columns.…”
Section: Methodsmentioning
confidence: 99%
“…In order to find the numerical value of the probability, we set the average degrees of the model to the observed ones and solve the set of nonlinear equations where and are the degree of the node r and c respectively, and ∗ indicates the observed empirical value. More details can be found in [ 40 ].…”
Section: Methodsmentioning
confidence: 99%
“…Observed values of structural coefficients were calibrated based on Undirected Binary Configuration Model (UBCM) [52]. The model induces a maximum entropy probability distribution over undirected and unweighted networks with n nodes constrained to have a specific expected degree sequence.…”
Section: Undirected Binary Configuration Modelmentioning
confidence: 99%
“…For the implementation of the BiCM, we used the recently released python module NEMtropy, presented in [61].…”
Section: The Bipartite Semantic Network and Its Validated Projectionmentioning
confidence: 99%
“…After the introduction of the BiCM in subsection B.1, we will show in subsection B.2 how the null-model can be used as a benchmark to validate the projection on one of the two layers, as proposed in [23]. Let us finally remark that the exact implementation of the null-model was performed via the python module NEMtropy, presented in [61].…”
Section: A Hashtag Cleaningmentioning
confidence: 99%