In the mouse mammary tumor virus promoter, a tandem of octamer motifs, recognized by ubiquitous and tissue-restricted Oct transcription factors, is located upstream of the TATA box and next to a binding site for the transcription factor nuclear factor I (NF-I). Their function was investigated with mutant long terminal repeats under different transfection conditions in mouse Ltk-cells and quantitative Si nuclease mapping of the transcripts. In stable transfectants, which are most representative of the state of proviral DNA with respect to both number of integrated DNA templates and chromatin organization, a long terminal repeat mutant of both octamer sites showed an average 50-fold reduction of the basal transcription level, while the dexamethasonestimulated level was unaffected. DNase I in vitro footprinting assays with L-cell nuclear protein extracts showed that the mutant DNA was unable to bind octamer factors but had a normal footprint in the NF-I site. I conclude that mouse mammary tumor virus employs the tandem octamer motifs of the viral promoter, recognized by the ubiquitous transcription factor Oct-i, for its basal transcriptional activity and the NF-I binding site, as previously shown, for glucocorticoid-stimulated transcription. A deletion mutant with only one octamer site showed a marked base-level reduction at high copy number but little reduction at low copies of integrated plasmids. The observed transcription levels may depend both on the relative ratio of transcription factors to DNA templates and on the relative affinity of binding sites, as determined by oligonucleotide competition footprinting. (14,15,21,48,52,61, 82) and progestins (17,20,41). Analysis by linker-scanning (LS) mutagenesis has defined multiple, distinct sequence elements acting cooperatively to achieve maximal glucocorticoid stimulation of the MMTV promoter (15, 16, 52). Two of them are located in DNA segments shown to bind in vitro the purified glucocorticoid receptor: the strongest, distal element (around position -175) cooperates with a weaker proximal one, which in turn requires a nuclear factor I (NF-I) binding site centered around position -70 (2,12,15,16,19,68,106). In vivo, NF-I binding was observed in conjunction with alterations of the chromatin structure brought about by hormone treatment (3,27, 81).In vitro footprinting studies with nuclear protein extracts of mouse tissues showed a protection against DNase I * Phone: (41 21) (-62 to -37) next to the NF-I binding site that are related to the octamer/NF-III recognition motifs and present as a 10-bp direct repeat (65). A similar configuration of adjacent NF-I and NF-III sites is found in the DNA of adenovirus type 2, in which both sites are required for viral DNA replication (84-86). Octamerrelated sequences occur in transcriptional regulatory elements of several genes, including the promoters of histone H2B (100) and of immunoglobulin light-and heavy-chain genes (30,79) and the enhancers of immunoglobulin heavy chain (6, 37), Ul and U2 small nuclear RNAs (25,51,6...