In the present work, the extractive desulfurization (EDS) technique was used to reduce the sulfur content from the liquid fuel using deep eutectic solvent (DES). The thermal method was used to prepare DES by adding tetramethylammonium chloride (TMAC) and choline chloride (ChCl) as hydrogen bond acceptors (HBA) and, at an appropriate molar ratio, using ethylene glycol (EG) as the hydrogen bond donor (HBD). In the EDS of sulfur-based model fuels, DESs ChCl:2EG and TMAC:2EG were used. The parametric study was performed to optimize the experimental conditions at a higher extraction efficiency. An efficiency of 47% was found using TMAC:2EG as the solvent in the EDS system; however, it increased to 73% with the use of multibatch extraction at optimized operating conditions: an initial concentration of 500 mg•L −1 , a time of 60 min, a stirring speed of 400 rpm, a DES-to-fuel ratio of 1:1, and a temperature set at 25 °C. The performance of DES was compared in the context of distribution coefficient, selectivity, capacity, and performance index at certain experimental conditions. The order and kinetic constant were determined by fitting first-, second-, and nth-order kinetic models representing the desulfurization kinetics at different temperatures. Mass transfer kinetics was also studied to calculate the overall mass transfer coefficient for the sulfur extraction process under the experimental operating conditions. The thermodynamics of extraction desulfurization has been studied to investigate the behavior of the extraction process, and Fourier transform infrared (FTIR) spectroscopy and proton nuclear magnetic resonance ( 1 HNMR) spectroscopy have been used for understanding the EDS mechanism.