The preferred way of life of Pseudomonas aeruginosa is aerobic respiration (38). When aeration is reduced or absent and nitrate is present, P. aeruginosa obtains energy from nitrate respiration (14,44). When neither oxygen nor nitrate is available, arginine can be used as the sole energy source for motility and growth (48,62). In this case, the arginine deiminase pathway serves to degrade arginine to ornithine and carbamoylphosphate, which allows regeneration of ATP from ADP without respiration (41,62). Anaerobic growth on arginine requires a rich medium and extended incubation; colonies take 4 to 5 days to form. Under these conditions, arginine is converted quantitatively to omithine and hence does not serve as a carbon source (62). Good aeration inhibits nitrate uptake (21) and prevents induction of the nitrate respiration enzymes (12) and of the arginine deiminase pathway in P. aeruginosa (34). Aerobic conditions favor the utilization of arginine as a carbon source via the succinylarginine pathway (13). The molecular mechanisms involved in the switch from aerobic to anaerobic metabolism in P. aeruginosa are unknown.In Escherichia coli and other enteric bacteria, thefnr gene is essential for the expression of fumarate and nitrate respiration and many other anaerobic processes (26,47,54,57,61). Thefnr-dependent genes and operons have a conserved symmetrical sequence, the FNR box, upstream of their promoters. Mutations in the FNR box interfere with anaerobic induction (8,16,24,54). It is generally accepted that under anaerobic conditions the FNR protein acts as a transcriptional activator by binding to the FNR box; however, a physical interaction between FNR and the FNR box has not been demonstrated (9, 54, 59).We are interested in the regulation of anaerobic metabolism in P. aeruginosa, especially in the induction of the arginine deiminase pathway by oxygen limitation. for this pathway are organized as an operon (arcDABC), which encodes a transmembrane protein having arginine/ ornithine antiporter activity (arcD), arginine deiminase (arcA), catabolic ornithine carbamoyltransferase (arcB), and carbamate kinase (arcC) (5, 6, 9a, 30, 31, 62). Most P. aeruginosa mutants that cannot grow anaerobically on arginine (Arc-phenotype) have a defect in the arcDABC operon (43, 62). Recently, we found a mutant whose Arc-phenotype is due to a mutation lying outside the arc operon (19). This mutation had originally been obtained by van Hartingsveldt et al. (63,64) and designated nirD. It causes inability of P. aeruginosa to grow anaerobically on nitrate (Nar-phenotype) and loss of dissimilatory nitrite reductase activity. Other genes required for nitrate respiration are unlinked to nirD (63,64). Here we show that a chromosomal fragment of P. aeruginosa complements the nirD mutant for anaerobic growth on nitrate and arginine and also restores anaerobic induction of nitrate reductase and arginine deiminase in the mutant. We therefore propose that nirD should be renamed anr (for anaerobic regulation of arginine deiminase and ni...