2023
DOI: 10.3389/fimmu.2023.1285106
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Exploring causal correlations between inflammatory cytokines and ankylosing spondylitis: a bidirectional mendelian-randomization study

Peng Fang,
Xiaozhou Liu,
Yang Qiu
et al.

Abstract: BackgroundThe impact of inflammatory factors on the development of Ankylosing Spondylitis (AS) is widely recognized, but the exact causal relationship remains unclear.MethodsThe bidirectional mendelian-randomization study utilized genetic data from a genome-wide association study (GWAS) of 186 AS cases and 456,162 controls of European ancestry. Inflammatory cytokines were obtained from a GWAS summary of 8,293 healthy participants. Causal associations were primarily investigated using the inverse variance-weigh… Show more

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Cited by 6 publications
(3 citation statements)
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“…First, we set P <5×10 -8 as the genome-wide significance threshold to select SNPs that were strongly associated with KOA and inflammatory cytokines. Because very few SNPs were identified for some of the cytokines upon exposure, a higher cutoff value ( P <5×10 -6 ) to ensure that there were enough SNPs for further MR analysis ( 40 , 41 ). Secondly, to avoid linkage disequilibrium, instrumental variables were removed to ensure mutual independence of these instrumental variables (r2 = 0.001, kb=10,000).…”
Section: Methodsmentioning
confidence: 99%
“…First, we set P <5×10 -8 as the genome-wide significance threshold to select SNPs that were strongly associated with KOA and inflammatory cytokines. Because very few SNPs were identified for some of the cytokines upon exposure, a higher cutoff value ( P <5×10 -6 ) to ensure that there were enough SNPs for further MR analysis ( 40 , 41 ). Secondly, to avoid linkage disequilibrium, instrumental variables were removed to ensure mutual independence of these instrumental variables (r2 = 0.001, kb=10,000).…”
Section: Methodsmentioning
confidence: 99%
“…GWAS data for these 41 inflammatory cytokines can be found in the IEU Open GWAS project 1 with corresponding GWAS IDs. Another 91 inflammatory cytokine GWAS were derived from a genome-wide protein quantitative trait locus study of circulating inflammatory proteins in 14,824 individuals of European ancestry (Zhao et al, 2023), including 11 study cohorts such as The INTERVAL study (median age 61 years). GWAS data for these 91 inflammatory factors are available through the GWAS Catalog project 2 with corresponding GWAS IDs.…”
Section: Data Sourcesmentioning
confidence: 99%
“…GWAS data for these 41 inflammatory cytokines can be found in the IEU Open GWAS project 1 with corresponding GWAS IDs. Another 91 inflammatory cytokine GWAS were derived from a genome-wide protein quantitative trait locus study of circulating inflammatory proteins in 14,824 individuals of European ancestry (Zhao et al, 2023), including 11 study cohorts such as The INTERVAL study (median age 61 years). GWAS data for these 91 inflammatory factors are available through the GWAS Catalog project 2 with corresponding GWAS IDs.…”
Section: Data Sourcesmentioning
confidence: 99%