Counter-rotating axial compressor (CRAC) is a promising potential technology to improve the thrust-to-weight ratio of aero-engines, but its special aerodynamic layout usually causes more pronounced flow unsteadiness. Understanding the unsteady flow features and mechanism in the CRAC contributes to the aerodynamic optimization design and flow control strategy organization. A data-driven dynamic mode decomposition method is introduced to investigate the tip flow unsteadiness in a CRAC, and the unsteady features of the tip flow at the design point (DP) and near-stall point (NSP) conditions are revealed. The results show that the 1.0 times blade passage frequency (BPF) and its multi-order harmonic frequency are the dominant frequencies for both rotors at the DP condition. At the NSP condition, the 1.0 BPF is no longer the dominant frequency causing the tip flow unsteadiness, and the low frequency fluctuation of the tip leakage flow becomes the dominant frequency to induce the flow unsteadiness. In the front rotor R1, the unsteady dominant frequency is 1.0 BPF, whereas in the rear rotor R2, the frequency (0.801 BPF and 0.803 BPF) of the tip leakage flow is the dominant frequency. By reconstructing the flow field under the NSP condition, the spatiotemporal evolution of the tip flow during the unsteady stable manifests that the interference effect between the rotors is an important source of the tip flow unsteadiness. The increase in flow unsteadiness leads to an increase in the reconstruction error, indicating that more modes are required to obtain a more accurate reconstruction flow field.