Abstract:Tandem mass spectrometry was used in the analysis of Cu + -D-glucose complexes. The MIKE spectrum of these complexes generated by FAB shows that the loss of a water molecule is the most important spontaneous fragmentation, followed by a second dehydration or the loss of H 2 , whereas the metal ion Cu + is never eliminated. A theoretical survey of the potential energy surface, based on the use of density functional theory approaches, shows that the attachment of Cu + to the different basic centers of glucose in… Show more
“…However, the m/z ratio 129 which corresponds to the loss of an H 2 O along with H 2 from the deprotonated d-ribose is observed with appreciable intensities. Loss of H 2 was observed previously in d-glucose complexed with Cu + [21], but not the loss of both H 2 and H 2 O. As discussed above, the conditions under which fragment ions are formed in ISD and PSD are very different.…”
Section: Fragmentation Mechanisms Of Deprotonated D-ribose In In-sourmentioning
confidence: 68%
“…collisional activation. These include studies of monosaccharides complexed with Pb 2+ [19,20], glucose with Cu + [21] and a number of trisaccharides complexed with the alkaline earth metal ions Ca 2+ and Mg 2+ [22].…”
“…However, the m/z ratio 129 which corresponds to the loss of an H 2 O along with H 2 from the deprotonated d-ribose is observed with appreciable intensities. Loss of H 2 was observed previously in d-glucose complexed with Cu + [21], but not the loss of both H 2 and H 2 O. As discussed above, the conditions under which fragment ions are formed in ISD and PSD are very different.…”
Section: Fragmentation Mechanisms Of Deprotonated D-ribose In In-sourmentioning
confidence: 68%
“…collisional activation. These include studies of monosaccharides complexed with Pb 2+ [19,20], glucose with Cu + [21] and a number of trisaccharides complexed with the alkaline earth metal ions Ca 2+ and Mg 2+ [22].…”
“…Geometrical structures of the complexes have been optimized by the density functional B3LYP method because this functional has been found well suited for description of ion-molecule complexes, inter-and intra-molecular hydrogen bonds [22][23][24][25][26][27]. The gradient-corrected B3LYP method uses Becke's three parameter exchange functional (B3) [28] with the Lee, Yang, and Parr correlation functional (LYP) [29].…”
The structures of the chelate Zn(PDTC) 2 and its dimeric form Zn 2 (PDTC) 4 are investigated theoretically at B3LYP/cc-pVDZ level. The natural bond orbital (NBO) analysis has been performed to explore the metal-ligand coordination of these chelates. In Zn(PDTC) 2 , the sulfur atoms mainly use 3p sub-shells to coordinate with mixed (4s ? 4p x ? 4p y ? 4p z ) orbital of zinc having sp 3 hybridization. In Zn 2 (PDTC) 4 , each zinc atom coordinates with one terminal and two bridging PDTC ligands. The contribution of bridging sulfur atoms in chelation is much more than terminal sulfurs. The bridging sulfur atoms use 3s and 3p sub-shells to coordinate with 4s and 4p sub-shells of metal center zinc. The charge transfer interactions between sulfur and metal center involving 4d, 5s, and 5p sub-shells of zinc are much feeble compared to those involving 4s and 4p sub-shells of zinc.
“…42 Previous studies also include other metal ion interactions with glucose, such as Cu + . 43 Recently, Bellesia and Gnanakaran 44 used MD simulations to examine the effect of aqueous sodium chloride on cellulose. However, to the best of our knowledge, no study has previously been published that would provide molecular-level understanding of glucose and sodium ion interactions in the aqueous phase.…”
In the last several decades, significant efforts have been conducted to understand the fundamental reactivity of glucose derived from plant biomass in various chemical environments for conversion to renewable fuels and chemicals. For reactions of glucose in water, it is known that inorganic salts naturally present in biomass alter the product distribution in various deconstruction processes. However, the molecular-level interactions of alkali metal ions and glucose are unknown. These interactions are of physiological interest as well, for example, as they relate to cation-glucose cotransport. Here, we employ quantum mechanics (QM) to understand the interaction of a prevalent alkali metal, sodium, with glucose from a structural and thermodynamic perspective. The effect on B-glucose is subtle: a sodium ion perturbs bond lengths and atomic partial charges less than rotating a hydroxymethyl group. In contrast, the presence of a sodium ion significantly perturbs the partial charges of α-glucose anomeric and ring oxygens. Molecular dynamics (MD) simulations provide dynamic sampling in explicit water, and both the QM and the MD results show that sodium ions associate at many positions with respect to glucose with reasonably equivalent propensity. This promiscuous binding nature of Na + suggests that computational studies of glucose reactions in the presence of inorganic salts need to ensure thorough sampling of the cation positions, in addition to sampling glucose rotamers. The effect of NaCl on the relative populations of the anomers is experimentally quantified with light polarimetry. These results support the computational findings that Na + interacts similarly with a-and B-glucose. ABSTRACT: In the last several decades, significant efforts have been conducted to understand the fundamental reactivity of glucose derived from plant biomass in various chemical environments for conversion to renewable fuels and chemicals. For reactions of glucose in water, it is known that inorganic salts naturally present in biomass alter the product distribution in various deconstruction processes. However, the molecular-level interactions of alkali metal ions and glucose are unknown. These interactions are of physiological interest as well, for example, as they relate to cation-glucose cotransport. Here, we employ quantum mechanics (QM) to understand the interaction of a prevalent alkali metal, sodium, with glucose from a structural and thermodynamic perspective. The effect on β-glucose is subtle: a sodium ion perturbs bond lengths and atomic partial charges less than rotating a hydroxymethyl group. In contrast, the presence of a sodium ion significantly perturbs the partial charges of α-glucose anomeric and ring oxygens. Molecular dynamics (MD) simulations provide dynamic sampling in explicit water, and both the QM and the MD results show that sodium ions associate at many positions with respect to glucose with reasonably equivalent propensity. This promiscuous binding nature of Na + suggests that computational studies of g...
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