Abstract:The availability of the complete genome sequence of several Salmonella enterica serovars has revealed the presence of unstable genetic elements in these bacteria, such as pathogenicity islands and prophages. This is the case of Salmonella enterica serovar Enteritidis (S. Enteritidis), a bacterium that causes gastroenteritis in humans and systemic infection in mice. The whole genome sequence analysis for S. Enteritidis unveiled the presence of several genetic regions that are absent in other Salmonella serovars… Show more
“…The cluster contains a Toll/interleukin-1 receptor domain containing protein SEN1975 or TlpA that might suppress NF-B induction while it promotes host cell apoptosis (28,31,32). A tlpA mutant was defective in intracellular survival inside human THP1 macrophages, and mice infected with the tlpA mutant survived the challenge better compared to the wild type (32).…”
Section: Resultsmentioning
confidence: 99%
“…A tlpA mutant was defective in intracellular survival inside human THP1 macrophages, and mice infected with the tlpA mutant survived the challenge better compared to the wild type (32). ROD21 also comprises two putative type IV pilin proteins (SEN1976 and SEN1978), which might be linked to several functions, including motility, adhesion, and biofilm and bacterial aggregate formation, as well as invasion (28,31). Also, two conjugational transfer proteins (SEN1979 and SEN1980) and a histone-like nucleoid-structuring regulator (SEN1993) are located on ROD21, of which the latter was shown to be a homologue of the uropathogenic E. coli hnsT gene, which promotes the expression of virulence genes (31).…”
Section: Resultsmentioning
confidence: 99%
“…ROD21 also comprises two putative type IV pilin proteins (SEN1976 and SEN1978), which might be linked to several functions, including motility, adhesion, and biofilm and bacterial aggregate formation, as well as invasion (28,31). Also, two conjugational transfer proteins (SEN1979 and SEN1980) and a histone-like nucleoid-structuring regulator (SEN1993) are located on ROD21, of which the latter was shown to be a homologue of the uropathogenic E. coli hnsT gene, which promotes the expression of virulence genes (31). Nevertheless, a role for ROD21 in reproductive tract colonization could not be demonstrated since a ROD21 deletion mutant had the same colonization levels in this organ as the wild type after oral inoculation (29).…”
c Salmonella enterica serovar Enteritidis has developed the potential to contaminate table eggs internally, by colonization of the chicken reproductive tract and internalization in the forming egg. The serotype Enteritidis has developed mechanisms to colonize the chicken oviduct more successfully than other serotypes. Until now, the strategies exploited by Salmonella Enteritidis to do so have remained largely unknown. For that reason, a microarray-based transposon library screen was used to identify genes that are essential for the persistence of Salmonella Enteritidis inside primary chicken oviduct gland cells in vitro and inside the reproductive tract in vivo. A total of 81 genes with a potential role in persistence in both the oviduct cells and the oviduct tissue were identified. Major groups of importance include the Salmonella pathogenicity islands 1 and 2, genes involved in stress responses, cell wall, and lipopolysaccharide structure, and the region-of-difference genomic islands 9, 21, and 40.
“…The cluster contains a Toll/interleukin-1 receptor domain containing protein SEN1975 or TlpA that might suppress NF-B induction while it promotes host cell apoptosis (28,31,32). A tlpA mutant was defective in intracellular survival inside human THP1 macrophages, and mice infected with the tlpA mutant survived the challenge better compared to the wild type (32).…”
Section: Resultsmentioning
confidence: 99%
“…A tlpA mutant was defective in intracellular survival inside human THP1 macrophages, and mice infected with the tlpA mutant survived the challenge better compared to the wild type (32). ROD21 also comprises two putative type IV pilin proteins (SEN1976 and SEN1978), which might be linked to several functions, including motility, adhesion, and biofilm and bacterial aggregate formation, as well as invasion (28,31). Also, two conjugational transfer proteins (SEN1979 and SEN1980) and a histone-like nucleoid-structuring regulator (SEN1993) are located on ROD21, of which the latter was shown to be a homologue of the uropathogenic E. coli hnsT gene, which promotes the expression of virulence genes (31).…”
Section: Resultsmentioning
confidence: 99%
“…ROD21 also comprises two putative type IV pilin proteins (SEN1976 and SEN1978), which might be linked to several functions, including motility, adhesion, and biofilm and bacterial aggregate formation, as well as invasion (28,31). Also, two conjugational transfer proteins (SEN1979 and SEN1980) and a histone-like nucleoid-structuring regulator (SEN1993) are located on ROD21, of which the latter was shown to be a homologue of the uropathogenic E. coli hnsT gene, which promotes the expression of virulence genes (31). Nevertheless, a role for ROD21 in reproductive tract colonization could not be demonstrated since a ROD21 deletion mutant had the same colonization levels in this organ as the wild type after oral inoculation (29).…”
c Salmonella enterica serovar Enteritidis has developed the potential to contaminate table eggs internally, by colonization of the chicken reproductive tract and internalization in the forming egg. The serotype Enteritidis has developed mechanisms to colonize the chicken oviduct more successfully than other serotypes. Until now, the strategies exploited by Salmonella Enteritidis to do so have remained largely unknown. For that reason, a microarray-based transposon library screen was used to identify genes that are essential for the persistence of Salmonella Enteritidis inside primary chicken oviduct gland cells in vitro and inside the reproductive tract in vivo. A total of 81 genes with a potential role in persistence in both the oviduct cells and the oviduct tissue were identified. Major groups of importance include the Salmonella pathogenicity islands 1 and 2, genes involved in stress responses, cell wall, and lipopolysaccharide structure, and the region-of-difference genomic islands 9, 21, and 40.
“…Sometimes a GI excises together with a part of or all of its surrounding tRNA, leading to the loss of this coding sequence (93). Interestingly, specific parts or a whole pathogenicity island can excise at a precise point of a pathological process to facilitate the next stage of an infection (as in Salmonella enterica serovar Enteritidis [111]). Following its excision, a GI can integrate into a different locus of the same chromosome or be transmitted to another cell by horizontal gene transfer (such as the 89K pathogenicity island in Streptococcus suis serotype 2 [112]).…”
SUMMARY
Bacterial genomes are remarkably stable from one generation to the next but are plastic on an evolutionary time scale, substantially shaped by horizontal gene transfer, genome rearrangement, and the activities of mobile DNA elements. This implies the existence of a delicate balance between the maintenance of genome stability and the tolerance of genome instability. In this review, we describe the specialized genetic elements and the endogenous processes that contribute to genome instability. We then discuss the consequences of genome instability at the physiological level, where cells have harnessed instability to mediate phase and antigenic variation, and at the evolutionary level, where horizontal gene transfer has played an important role. Indeed, this ability to share DNA sequences has played a major part in the evolution of life on Earth. The evolutionary plasticity of bacterial genomes, coupled with the vast numbers of bacteria on the planet, substantially limits our ability to control disease.
“…While most of the SPIs are not likely to retain their mobility, the ability of some Salmonella genomic islands to excise and transfer has been demonstrated. This excision is also inducible for some regions upon exposure to host conditions, such as macrophage survival and oxidative stress (112).…”
Section: Impact Of Horizontal Gene Transfer On Genome Evolution and Hmentioning
SUMMARY
Enteric pathogens such as
Salmonella enterica
cause significant morbidity and mortality.
S. enterica
serovars are a diverse group of pathogens that have evolved to survive in a wide range of environments and across multiple hosts.
S. enterica
serovars such as
S
. Typhi,
S
. Dublin, and
S
. Gallinarum have a restricted host range, in which they are typically associated with one or a few host species, while
S
. Enteritidis and
S
. Typhimurium have broad host ranges. This review examines how
S. enterica
has evolved through adaptation to different host environments, especially as related to the chicken host, and continues to be an important human pathogen. Several factors impact host range, and these include the acquisition of genes via horizontal gene transfer with plasmids, transposons, and phages, which can potentially expand host range, and the loss of genes or their function, which would reduce the range of hosts that the organism can infect.
S
. Gallinarum, with a limited host range, has a large number of pseudogenes in its genome compared to broader-host-range serovars.
S. enterica
serovars such as
S
. Kentucky and
S
. Heidelberg also often have plasmids that may help them colonize poultry more efficiently. The ability to colonize different hosts also involves interactions with the host's immune system and commensal organisms that are present. Thus, the factors that impact the ability of
Salmonella
to colonize a particular host species, such as chickens, are complex and multifactorial, involving the host, the pathogen, and extrinsic pressures. It is the interplay of these factors which leads to the differences in host ranges that we observe today.
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