2021
DOI: 10.1126/sciadv.abi6178
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Evolutionary epigenomic analyses in mammalian early embryos reveal species-specific innovations and conserved principles of imprinting

Abstract: Evolutionary analyses reveal conservation and divergence of epigenetic transition during early development across mammals.

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Cited by 43 publications
(80 citation statements)
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References 83 publications
(201 reference statements)
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“…Conversely, H3K36me3 domains are more widespread in the mouse, likely reflecting a greater prevalence of non-genic transcripts in the mouse (39). Analysis of recently published H3K27me3 CUT&RUN data from rat oocytes (60) reveals a strong correlation with our data (Spearman rank correlation 0.95, Sup. fig.…”
Section: Resultssupporting
confidence: 85%
“…Conversely, H3K36me3 domains are more widespread in the mouse, likely reflecting a greater prevalence of non-genic transcripts in the mouse (39). Analysis of recently published H3K27me3 CUT&RUN data from rat oocytes (60) reveals a strong correlation with our data (Spearman rank correlation 0.95, Sup. fig.…”
Section: Resultssupporting
confidence: 85%
“…Comprehensive genome scans for imprinted genes in species with little or no previous evidence for GI bring important information, since it promotes the understanding of both GI evolution and related phenomena such as methylation reprogramming and allele-specific expression, which regulate key biological processes in vertebrates ( Frésard et al, 2014 ; Zhuo et al, 2017 ; Skvortsova et al, 2019 ). A recent epigenome comparison across five placental mammals notably showed striking species-specific features, with distinct GI mechanisms between humans, nonrodents and rodents ( Lu et al, 2021 ).…”
Section: Discussionmentioning
confidence: 99%
“…A characterization of the molecular events accompanying the maturation of the oocyte, fertilization and the early cleavage stages of embryonic development may provide some insight into what can potentially go wrong in those pregnancies that fail in these early stages. Omics technologies have enabled in-depth analysis of molecular mechanisms of bovine preimplantation development including a catalog of the transcripts present (17,18,(38)(39)(40) and the state of the epigenome (DNA methylation status (41,42), chromatin dynamics (43,44), histone modifications (45), and the range of small RNAs (46,47)). However, the mRNA translation landscape and particularly the translational controls operating on specific mRNAs in oocytes and embryos remain largely unstudied.…”
Section: Discussionmentioning
confidence: 99%