Abstract:Herbicides
are a key element in agriculture but they do cause environmental
problems and natural alternatives are being sought. In this context,
invasive plants could provide an as yet unexplored source for the
development of future herbicides. Urochloa humidicola has great invasive potential in Brazilian environments as it hampers
the establishment of other plants. The phytotoxicity of U.
humidicola root extracts has been evaluated, and the major
components have been identified. The phytotoxicity of the extra… Show more
“…Seasonal and regional differences in accumulation of secondary products may cause differences in staining for flow cytometry. Secondary metabolites and their phytotoxicity on forage legumes have been recognized in Urochloa tropical forage grasses [ 21 , 22 , 23 , 24 ], which has been suggested to make it difficult to analyze these plants by flow cytometry [ 25 ].…”
Urochloa (including Brachiaria, Megathyrus and some Panicum) tropical grasses are native to Africa and are now, after selection and breeding, planted worldwide, particularly in South America, as important forages with huge potential for further sustainable improvement and conservation of grasslands. We aimed to develop an optimized approach to determine ploidy of germplasm collection of this tropical forage grass group using dried leaf material, including approaches to collect, dry and preserve plant samples for flow cytometry analysis. Our methods enable robust identification of ploidy levels (coefficient of variation of G0/G1 peaks, CV, typically <5%). Ploidy of some 348 forage grass accessions (ploidy range from 2x to 9x), from international genetic resource collections, showing variation in basic chromosome numbers and reproduction modes (apomixis and sexual), were determined using our defined standard protocol. Two major Urochloa agamic complexes are used in the current breeding programs at CIAT and EMBRAPA: the ’brizantha’ and ’humidicola’ agamic complexes are variable, with multiple ploidy levels. Some U. brizantha accessions have odd level of ploidy (5x), and the relative differences in fluorescence values of the peak positions between adjacent cytotypes is reduced, thus more precise examination of this species is required. Ploidy measurement of U. humidicola revealed aneuploidy.
“…Seasonal and regional differences in accumulation of secondary products may cause differences in staining for flow cytometry. Secondary metabolites and their phytotoxicity on forage legumes have been recognized in Urochloa tropical forage grasses [ 21 , 22 , 23 , 24 ], which has been suggested to make it difficult to analyze these plants by flow cytometry [ 25 ].…”
Urochloa (including Brachiaria, Megathyrus and some Panicum) tropical grasses are native to Africa and are now, after selection and breeding, planted worldwide, particularly in South America, as important forages with huge potential for further sustainable improvement and conservation of grasslands. We aimed to develop an optimized approach to determine ploidy of germplasm collection of this tropical forage grass group using dried leaf material, including approaches to collect, dry and preserve plant samples for flow cytometry analysis. Our methods enable robust identification of ploidy levels (coefficient of variation of G0/G1 peaks, CV, typically <5%). Ploidy of some 348 forage grass accessions (ploidy range from 2x to 9x), from international genetic resource collections, showing variation in basic chromosome numbers and reproduction modes (apomixis and sexual), were determined using our defined standard protocol. Two major Urochloa agamic complexes are used in the current breeding programs at CIAT and EMBRAPA: the ’brizantha’ and ’humidicola’ agamic complexes are variable, with multiple ploidy levels. Some U. brizantha accessions have odd level of ploidy (5x), and the relative differences in fluorescence values of the peak positions between adjacent cytotypes is reduced, thus more precise examination of this species is required. Ploidy measurement of U. humidicola revealed aneuploidy.
“…These comprise brachialactol, different flavones (especially quercetin glycosides) and saponins, but especially different phenolic acids, i.e., p -coumaric acid, p -hydroxy-benzoic acid and vanillic acid ( Supplementary Table S12 ; Supplementary Material ). These allelopathica have been proposed to be responsible for the suppression of companion plants (e.g., grass-legume mixtures) and responsible for the dominance of B. humidicola in many ecosystems ( Souza Filho et al, 2005 ; Oliveira et al, 2017 ; Feitoza et al, 2018 ; Feitoza et al, 2020 ). However, with regard to nitrification inhibition, none of the discussed phenolic acids ( p -coumaric acid, ferulic acid, p -hydroxy-benzoic acid, vanillic acid) showed inhibitory activity against N. europaea , which was tested in vitro with concentrations up to 100 mg·L −1 (data not shown).…”
Introduction: Biological Nitrification Inhibition (BNI) is defined as the plant-mediated control of soil nitrification via the release of nitrification inhibitors. BNI of Brachiaria humidicola (syn. Urochloa humidicola) has been mainly attributed to root-exuded fusicoccane-type diterpenes, e.g., 3-epi-brachialactone. We hypothesized, however, that BNI of B. humidicola is caused by an assemblage of bioactive secondary metabolites.Methods:B. humidicola root exudates were collected hydroponically, and metabolites were isolated by semi-preparative HPLC. Chemical structures were elucidated by HRMS as well as 1D and 2D NMR spectroscopy. Nitrification inhibiting potential of isolated metabolites was evaluated by a Nitrosomonas europaea based bioassay.Results and discussion: Besides previously described brachialactone isomers and derivatives, five phenol and cinnamic acid derivatives were identified in the root exudates of B. humidicola: 2-hydroxy-3-(hydroxymethyl)benzaldehyde, vanillin, umbelliferone and both trans- and cis-2,6-dimethoxycinnamic acid. Notably, vanillin revealed a substantially higher nitrification inhibiting activity than 3-epi-brachialactone (ED50 ∼ 12.5 μg·ml−1, ED80 ∼ 20 μg·ml−1), identifying this phenolic aldehyde as novel nitrification inhibitor (NI). Furthermore, vanillin exudation rates were in the same range as 3-epi-brachialactone (1–4 μg·h−1·g−1 root DM), suggesting a substantial contribution to the overall inhibitory activity of B. humidicola root exudates. In relation to the verification of the encountered effects within soils and considering the exclusion of any detrimental impact on the soil microbiome, the biosynthetic pathway of vanillin via the precursor phenylalanine and the intermediates p-coumaric acid/ferulic acid (precursors of further phenolic NI) might constitute a promising BNI breeding target. This applies not only to Brachiaria spp., but also to crops in general, owing to the highly conserved nature of these metabolites.
“…In the past few years, metabolic, cytotoxic, and phytotoxic − studies have been carried out to assess the ecosystem impact of anthropogenic activities. In the field of ecotoxicology, the use of plant phytotoxicity tests has being continuously growing from the 1970s, − as they have been shown to be valuable indicators for environmental monitoring and toxicity assessment of pure soluble compounds, complex mixtures, and waters (surface, ground, domestic, industrial, and soil leachates). In particular, Lactuca sativa is a model organism that has been recommended for phytotoxicity testing in the guidelines issued by competent organizations. − In fact, the germination of these seeds and the subsequent root growth are very susceptible to the presence of herbicides such as 2,4-D (2,4-dichlorophenoxy acetic acid), atrazine (2-chloro-4-ethylamino-6-isopropylamino-1,3,5-triazine), glyphosate ( N -phosphonomethyl glycine), and paraquat (1,1-dimethyl-4,4-bipyridinium dichloride).…”
Extracting practical information from the large amounts
of data
gathered during the live imaging analysis of plant organs is a challenging
issue. The present work investigates the use of the logistic growth
model to analyze experimental data from root elongation assays performed
in milli-fluidic devices with in situ imaging. Lactuca sativa was used as a bioindicator and was subjected
to wide concentration ranges
of four different herbicides: 2,4-D, atrazine, glyphosate, and paraquat.
The model parameters were directly connected to standard indicators
of toxicity and plant development, such as the LD50 and
the absolute growth rate, respectively. In addition, it was found
that realistic predictions of the maximum root length can be achieved
about 60 h before the bioassay end point, which could significantly
shorten the turnaround time. The combination of milli-fluidic devices,
real-time imaging, and model-based data analysis becomes a powerful
tool for environmental studies and ecotoxicity testing.
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