2013
DOI: 10.1134/s0965545x1308004x
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Evaluation of the characteristic equilibration times of bulk polyimides via full-atomic computer simulation

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Cited by 27 publications
(70 citation statements)
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“…To maintain the set lengths of the bonds between the atoms, the LINCS algorithm was used. 52,53,[60][61][62][63][64][65] The equilibration procedure included stages of the system compression from the initial low-density configuration (polymer gas), cyclic annealing within the temperature range of 600 to 290 K, equilibration at a high temperature for 1.5 μs, and further production run during 1 μs. Parametrization of the charges in this force field was done using the HF/6-31G* method.…”
Section: Model and Simulation Methodsmentioning
confidence: 99%
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“…To maintain the set lengths of the bonds between the atoms, the LINCS algorithm was used. 52,53,[60][61][62][63][64][65] The equilibration procedure included stages of the system compression from the initial low-density configuration (polymer gas), cyclic annealing within the temperature range of 600 to 290 K, equilibration at a high temperature for 1.5 μs, and further production run during 1 μs. Parametrization of the charges in this force field was done using the HF/6-31G* method.…”
Section: Model and Simulation Methodsmentioning
confidence: 99%
“…74 The values of the partial charges for the atoms of carboxyl groups attached to the CNT were taken as standard values for the Gromos53a5 force field 72 which was parameterized for simulating systems in the media with low permittivity. 52,62 Since the presence of EI slows down the diffusion of the polyimide chains in the melt approximately by two orders of magnitude, 52,61,62 the simulation with switched-on electrostatics was performed using the equilibrated configurations of the systems with switched-off electrostatics. 72,75 The same method was used to calculate the partial atomic charges in the considered polyimides.…”
Section: Model and Simulation Methodsmentioning
confidence: 99%
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“…Constant temperature (600 K, that is 5K higher than the experimentally-determined value of the R-BAPB melting temperature) and pressure P ¼ 1 atm were maintained using a Berendsen thermostat and barostat, 48,49 with time constants of s T ¼ 0.1 ps and s P ¼ 0.5 ps, respectively. These parameters were used in our previous papers [42][43][44][45][46] and allowed us to reproduce successfully thermophysical properties of bulk PIs. All bond lengths were kept constant with the LINCS algorithm 50 .…”
Section: 47mentioning
confidence: 99%
“…Thus, we can conclude that the cell size is large enough and the effects observed are due to interaction of the polymer with the nanoller surface but not due to steric hindrance between parallel at surfaces. As shown in our recent studies, [42][43][44][45][46] in some cases the atomic partial charges could be taken equal to zero in order to make the long microsecond-scale equilibration possible with the available supercomputer resources. The accounting of the atomic partial charges in computer simulation may, in principle, inuence signicantly the nal results, especially when the compounds contain highly-polarized chemical groups.…”
Section: 47mentioning
confidence: 99%