Evaluation of direct analysis in real time ionization–mass spectrometry (DART–MS) in fish metabolomics aimed to assess the response to dietary supplementation

Čajka, Tomáš; Danhelova, Hana; Vavrecka, Antonin; Riddellová, Kateřina; Kocourek, Vladimı́r; Vácha, František; Hajšlová, Jana

doi:10.1016/j.talanta.2013.04.025

Cited by 44 publications

(26 citation statements)

References 43 publications

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“…Muscle profiles of common carp ( Cyprinus carpio L.) fed manufactured or natural feed also showed a reduction in PUFA coupled to an increase in saturated fatty acids (SFA) and MUFA in fish fed the manufactured diet (Cajka et al . ). These metabolomic assessments are in line with traditional approaches based on fish muscle composition after dietary challenges with plant‐based diets and are related to the deficiency of EFA in these manufactured feeds (Guillou et al .…”

Section: Feeding Habits and Fish Fillet Qualitymentioning

confidence: 97%

Metabolomics and fish nutrition: a review in the context of sustainable feed development

Roques

Deborde

Richard

et al. 2018

Reviews in Aquaculture

106

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Aquaculture is facing a strategic challenge to improve feed suitability and support the global increase in fish production. Improvements in diet formulation for sustainable nutritional strategies have focused to date on the partial substitution of marine resources by plant resources but will now include other alternative feedstuffs. Growth trials and body composition data provide valuable indicators of fish nutritional status, while omics technologies may contribute to a better understanding of fish nutrition and help to demonstrate how feed and nutrients act in fish metabolism. Metabolomic approaches give an insight into fish metabolism through a non‐targeted analysis of metabolites in tissues or biofluids that involve multiple factors affecting fish, such as nutrition. In this review, we highlight the outcomes of publications in metabolomics applied to fish nutrition. We explain the concept of metabolomics and discuss specific technical considerations related to sample type, sampling and sample preparation. We show how metabolomic studies help to elucidate the impact of nutrition on fish fillet composition and fish metabolism. Finally, we describe the potential applications of metabolomic approaches for the non‐invasive monitoring of fish nutritional status.

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Section: Feeding Habits and Fish Fillet Qualitymentioning

confidence: 97%

Metabolomics and fish nutrition: a review in the context of sustainable feed development

Roques

Deborde

Richard

et al. 2018

Reviews in Aquaculture

106

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“…); effects of nutrient supplementation in sea bream, salmon and carp (Cajka et al . ; Robles et al . ; Anderson et al .…”

Section: Metabolomics Applications In Aquaculturementioning

confidence: 99%

Showcasing metabolomic applications in aquaculture: a review

Young

Alfaro

2016

Reviews in Aquaculture

126

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Aquaculture production is currently challenged to meet the growing demands for seafood protein throughout the world. To achieve this growth in an efficient, safe and sustainable manner, novel tools and applications will need to be incorporated at each step of the production line. A variety of 'omics' (e.g., transcriptomics, proteomics, metabolomics) applications have already begun to emerge in aquaculture research with extreme success. A promising new 'omics' approach is metabolomics, which aims to use metabolite profiles to identify biomarkers indicative of physiological responses of living samples (e.g., whole organism, tissues, cells) to environmental or culture conditions. One of the benefits of this approach is that it uses a broad scan of biological conditions to identify often unexpected problem or risk areas to focus management attention. In this contribution, we have selected relevant research examples to showcase the applications of metabolomics in aquaculture in four major areas: hatchery production, nutrition and diet, disease and immunology, and food safety and quality. The novelty of this approach is highlighted by the fact that we have cited the majority of published papers in this field, and these are all recent (within the last decade) contributions.

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“…Applications in food quality and safety using DART-MS have been extensively reviewed. 154, 156 Examples include metabolomic fingerprinting for differentiating common carp muscles according to feeding history, 157 beer origin recognition, 158 authentication of milk and milk-based products, 159 differentiating vegetables from organic and conventional farming, 160 and studying ripening stages in fruit. 161 …”

Section: Foodomicsmentioning

confidence: 99%

Ambient mass spectrometry in metabolomics

Clendinen

Monge

Fernández

2017

Analyst

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Since the introduction of desorption electrospray ionization (DESI) mass spectrometry (MS), ambient MS methods have seen increased use in a variety of fields from health to food science. Increasing its popularity in metabolomics, ambient MS offers limited sample preparation, rapid and direct analysis of liquids, solids, and gases, in situ and in vivo analysis, and imaging. The metabolome consists of a constantly changing collection of small (<1.5KDa) molecules. These include endogenous molecules that are part of primary metabolism pathways, secondary metabolites with specific functions such as signaling, chemicals incorporated in the diet or resulting from environmental exposures, and metabolites associated with the microbiome. Characterization of the responsive changes of this molecule cohort is the principle goal in any metabolomics study. With adjustments to experimental parameters, metabolites across a range of chemical and physical properties can be selectively desorbed and ionized and subsequently analyzed with increased speed and sensitivity. This review covers the broad applications of a variety of ambient MS techniques in four primary fields in which metabolomics is commonly employed.

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Evaluation of direct analysis in real time ionization–mass spectrometry (DART–MS) in fish metabolomics aimed to assess the response to dietary supplementation

Cited by 44 publications

References 43 publications

Metabolomics and fish nutrition: a review in the context of sustainable feed development

Metabolomics and fish nutrition: a review in the context of sustainable feed development

Showcasing metabolomic applications in aquaculture: a review

Ambient mass spectrometry in metabolomics

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