Colonization is the survival of a microorganism on an internal (gastrointestinal, respiratory, or genitourinary tract) or external (skin) surface of the host without causing disease. Different types of organisms colonize different surfaces. For example, skin and the mucous membranes of the nose may be colonized with gram-positive organisms, including Staphylococcus aureus and coagulase-negative staphylococci [1]. The pharynx is colonized with gram-positive and gram-negative organisms including Streptococcus pneumoniae, Haemophilus influenzae, and Moraxella catarrhalis [2]. Gram-negative aerobic and anaerobic organisms commonly found colonizing the gastrointestinal tract include gram-negative aerobic and anaerobic bacteria and gram-positive organisms including Enterococcus and C. difficile.Hosts encounter microbes on a nearly constant basis from the environment around them. A patient's own colonizing flora can result in hospital-associated infections when host defenses are compromised by underlying disease, immune compromise, or invasive devices. Alternatively, the healthcare environment can provide a source of pathogens, either by indirect transmission on the hands of healthcare workers (HCWs) or by direct transfer from environmental contamination.The outcome of human-microbe interactions depends on the complex interplay of host defenses against microbial invasion and microbial virulence factors. If microbes are not killed by the immune system, a commensal relationship between the colonizer and the host may develop; alternatively, this may be the first step in the process of infection, damaging the host as a result of multiplication of the microorganism. Prolonged illness leading to immunodeficiency and breaks in barriers