Genomic DNA sequences of equine herpesvirus type 1 (EHV-1) have been cloned as BamHI and EcoRI restriction fragments into the plasmid pBR322 and propagated in Escherichia coli. With the exception of two EcoRI restriction fragments that reside in the S region of the viral genome, all of the cloned fragments demonstrated the same electrophoretic mobilities, restriction cleavage sites, and blot-hybridization patterns as did the parent fragments produced by BamHI or EcoRI digestion of virion DNA. The EcoRI J fragment and the BamHI E fragment of the L-region terminus were cloned after the addition of appropriate linker oligonucleotides. Fragments originating from each of the two isomeric forms of EHV-1 DNA were contained in this library of clones. Supramolar DNA fragments present only in the DNA of defective interfering (DI) particles of EHV-1 were generated from Bgl II digestion of DNA preparations enriched for EHV-1 DI particles and were cloned as Bgl II and EcoRI fragments into the plasmid vector. The cloned viral sequences represented in this defective genome mapped to the S region of EHV-1 DNA. Blothybridization analysis ofEHV-1 transformed and tumor cell DNAs with the cloned BamHI B fragment confirmed that subgenomic viral sequences are present and indicated that those sequences map to the viral genome between 0.32 and 0.43 map unit.The EHV41 genome is a 92-megadalton (MDal) DNA molecule comprised of L and S covalently linked regions. Only the S region contains unique sequences flanked by inverted repetitive sequences (1) which allow the genome to exist in two isomeric forms (2). Upon repeated, high-multiplicity passage of EHV-1 in animals (3) or cell culture (4, 5), defective interfering (DI) particles, whose genome is comprised of tandem repeat units originating from the S region (1, 4), emerge. One striking consequence ofthe interference activity ofthese DI particles is that infection of permissive hamster embryo cells with viable preparations of these defective particles results in oncogenic transformation and establishment of persistent infection (1, 6). Because DNA sequences located in the L region appear to be associated with EHV-1 oncogensis (7), we have proposed a model in which these herpesvirus DI particles mediate oncogenic transformation indirectly by tempering cytocidal viral functions and thereby allowing oncogenic DNA sequences to be dominantly expressed (6).One approach for providing ample quantities of viral DNA sequences necessary for biochemical analyses of virus-transformed cells is the insertion of viral DNA restriction enzyme fragments by recombinant DNA methods into plasmids for subsequent propagation in bacteria. In this report we describe the isolation and characteristics of cloned plasmids containing restriction fragments of EHVr1 standard and defective genomes and demonstrate the utilization of cloned viral DNA fragments to identify EHV-1 DNA sequences in oncogenically transformed and tumor cells.
MATERIALS AND METHODSCells, Virus, and DNA. Procedures have been described for...