2014
DOI: 10.1128/jvi.03378-13
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Epstein-Barr Virus Latent Membrane Protein 1 Genetic Variability in Peripheral Blood B Cells and Oropharyngeal Fluids

Abstract: We report the diversity of latent membrane protein 1 (LMP1) gene founder sequences and the level of Epstein-Barr virus (EBV) genome variability over time and across anatomic compartments by using virus genomes amplified directly from oropharyngeal wash specimens and peripheral blood B cells during acute infection and convalescence. The intrahost nucleotide variability of the founder virus was 0.02% across the region sequences, and diversity increased significantly over time in the oropharyngeal compartment (P … Show more

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Cited by 20 publications
(21 citation statements)
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“…However, the technical aspects of these papers leave much to be desired and there is a need to reproduce them using modern sensitive, quantitative techniques. This is especially true in light of recent work from the laboratory of Katherine Luzuriaga (Renzette et al 2014). They have presented intriguing evidence from deep sequencing of EBV within infected individuals that variants are primarily generated over time in saliva not in the blood.…”
Section: Other Sites Of Ebv Persistencementioning
confidence: 95%
“…However, the technical aspects of these papers leave much to be desired and there is a need to reproduce them using modern sensitive, quantitative techniques. This is especially true in light of recent work from the laboratory of Katherine Luzuriaga (Renzette et al 2014). They have presented intriguing evidence from deep sequencing of EBV within infected individuals that variants are primarily generated over time in saliva not in the blood.…”
Section: Other Sites Of Ebv Persistencementioning
confidence: 95%
“…In addition to B95.8-LMP1, a large number of LMP1 sequence variants have been isolated predominantly from NPC samples or healthy carriers of different geographical regions of the world (Hu et al 1991;Miller et al 1994;Sandvej et al 1997;Hatton et al 2014;Lorenzetti et al 2012;Renzette et al 2014). Due to space limitations, a detailed description of such LMP1 variants cannot be given here.…”
Section: Carboxy-terminal Signaling Domainmentioning
confidence: 97%
“…B cells were isolated from whole blood using a RosetteSep human B-cell kit (Stemcell Technologies, Vancouver, BC, Canada). DNA was extracted using a Qiagen DNeasy blood and tissue kit (Valencia, CA), and blood viral loads were measured using a Roche LightCycler EBV quantification kit (Roche, Indianapolis, IN) (17,46).…”
Section: Methodsmentioning
confidence: 99%
“…Recent studies, including our own, have demonstrated that dsDNA viruses can exhibit levels of variation similar to those observed in some RNA viruses, such as West Nile virus and HIV-1 (16,17). Most published EBV gp350 sequences have originated from either transformed B-cell lines or cancerous tissue; at present, only a very limited number of primary EBV gp350 sequences are available (18).…”
mentioning
confidence: 99%