2023
DOI: 10.1111/1755-0998.13772
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Environmental DNA phylogeography: Successful reconstruction of phylogeographic patterns of multiple fish species from cups of water

Abstract: Since its emergence in 1980s, the field of phylogeography has rapidly developed as an integrative field of science linking micro-and macro-evolutionary processes (

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Cited by 9 publications
(18 citation statements)
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“…Moreover, DNA retrieved from environmental or community samples could represent a better alternative than traditional sampling in the case of particularly abundant and diverse populations, for which getting a representative sample of individuals would be very time consuming and costly. It could also be particularly useful for particular fields where only presence-absence data are required such as phylogeography, as shown by Pedersen et al (2021) or Tsuji et al (2023). To date, the effect of quantification biases on population genetics metrics is a rather speculative field with little empirical testing.…”
Section: Issue # 2: Correl Ati On B E T Ween Obs Erved and True Allel...mentioning
confidence: 99%
“…Moreover, DNA retrieved from environmental or community samples could represent a better alternative than traditional sampling in the case of particularly abundant and diverse populations, for which getting a representative sample of individuals would be very time consuming and costly. It could also be particularly useful for particular fields where only presence-absence data are required such as phylogeography, as shown by Pedersen et al (2021) or Tsuji et al (2023). To date, the effect of quantification biases on population genetics metrics is a rather speculative field with little empirical testing.…”
Section: Issue # 2: Correl Ati On B E T Ween Obs Erved and True Allel...mentioning
confidence: 99%
“…Environmental DNA (eDNA) technique has been widely employed for species detection (Ficetola et al., 2008), the creation of species catalogs for specific sites (Klymus et al., 2017; Miya et al., 2015), and analysis of intraspecific genetic diversity (Andres et al., 2023; Sigsgaard et al., 2016; Tsuji et al., 2023). Due to its non‐invasive nature and lack of requirement for expert species identification, the eDNA technique has been gaining momentum as a standard in ecological monitoring.…”
Section: Introductionmentioning
confidence: 99%
“…
Environmental DNA (eDNA) technique has been widely employed for species detection (Ficetola et al, 2008), the creation of species catalogs for specific sites (Klymus et al, 2017;Miya et al, 2015), and analysis of intraspecific genetic diversity (Andres et al, 2023;Sigsgaard et al, 2016;Tsuji et al, 2023). Due to its non-invasive nature and lack of requirement for expert species identification, the eDNA technique has been gaining momentum as a standard in ecological monitoring.Recently, environmental RNA (eRNA) has also begun to attract attention for its potential utility as well as eDNA (Cristescu, 2019).As eRNA is less stable than eDNA (Jo et al, 2022;Kagzi et al, 2022), eRNA can reduce false positives associated with detecting dead organisms, thereby providing a real-time 'snapshot' of a living species (Giroux
…”
mentioning
confidence: 99%
“…Thus, the intraspecific phylogeographic pattern of B. toni might provide insights into the palaeogeological and climatic events that have shaped the distribution and diversity of living organisms on the Hokkaido island. Although eDNA analyses have captured large‐scale intraspecific genetic diversity (Tsuji et al., 2023; Weitemier et al., 2021), no studies have addressed the novel histories of freshwater fishes over evolutionary timescales using eDNA till date.…”
Section: Introductionmentioning
confidence: 99%