Two strains of Chlorella vulgaris Beijerinck isolated from two different sites in Laguna de Bay, Philippines, were studied for their resistance and ability to remove four metal ions, i.e., Cu 2+ , Cr 6+ , Pb 2+ , and Cd 2+ added separately in BG-11 growth medium. The growth of the two strains was severely inhibited at 2 mg.l −1 of Cu 2+ , 5 mg.l −1 of Cr 6+ , 8 mg.l −1 of Pb 2+ , and 10 mg.l −1 of Cd 2+ . However, the two strains exhibited different EC 50 values for the same metal ion. The WB strain had a significantly higher resistance (p<0.01) for Cd 2+ and Cr 6+ compared with the SB strain, while the SB strain had significantly higher resistance (p<0.01) for Cu 2+ compared with the WB strain. On the other hand, the two strains behaved differently in their capacity to remove the metal ions in BG-11 medium containing 1.0 mg.L −1 of the three metal ions, except for Cu 2+ , which was added at 0.1 mg.L −1 . The WB strain showed the highest removal of Cd 2+ at 70.3% of total, followed by Pb 2+ at 32%, while the SB strain exhibited the highest removal of Pb 2+ at 48.7% followed by Cd 2+ at 40.7% of the total. Both strains showed the least removal of Cr 6+ at 28% and 20.8% of the total for the WB and SB strains respectively. The percentage removal for Cu 2+ was 50.7% and 60.8% for the WB and SB strains respectively. After 12 days of incubation, both strains showed that a greater percentage of the metal ions removed were accumulated intracellularly than adsorbed at a ratio of at least 2:1. Both strains manifested the same cytological deformities, like a loss of pyrenoids at 10 mg.L −1 in all four metal ions. Discoloration and disintegration of chloroplasts were observed at 1.0 mg.L −1 in Cu 2+ and 5 mg.L −1 in Cr 6+ . The nonrelease of autospores from the mother cells was observed at 10 mg.L −1 in Cu 2+ and Cr 6+ .