Abstract:Degradation of proteins from the endoplasmic reticulum is fundamental to quality control within the secretory pathway, serves as a way of regulating levels of crucial proteins, and is utilized by viruses to enhance pathogenesis. In yeast two ubiquitin-conjugating enzymes (E2s), UBC6p and UBC7p are implicated in this process. We now report the characterization of murine homologs of these E2s. MmUBC6 is an integral membrane protein that is anchored via its hydrophobic Cterminal tail to the endoplasmic reticulum.… Show more
“…Retention in the ER and subsequent breakdown of αTCR in the absence of other TCR subunits is one of the best studied examples of ERAD [5][6][7]12,20,[38][39][40][41][42][43][44][45]. ERAD is generally regarded as a UPS-dependent process requiring VCP Ufd1-Npl4 for retrotranslocation of substrates from the ER into the cytosol [19,25,26,46].…”
Section: Discussionmentioning
confidence: 99%
“…It is not known what specific structural feature or association with what protein triggers αTCR ubiquitination, but it is required not only for its targeting to the 26S proteasomes, but also for its retrotranslocation from the ER [11,12]. Ubiquitination of αTCR is mediated by at least two different ubiquitin ligases (E3s): cytosolic SCF Fbs1,2 which recognizes N-linked oligosaccharides attached to dislocated αTCR chain [13] and ER-membrane associated HRD1 [14].…”
Summaryα chain of T-cell receptor (TCR) is a typical ERAD (ER-associated degradation) substrate degraded in the absence of other TCR subunits. Depletion of derlin1 fails to induce accumulation of αTCR despite inducing accumulation of α1-antitrypsin, another ERAD substrate. Furthermore, while depletion of VCP does not affect levels of α1-antitrypsin, it induces an increase in levels of αTCR. RNAi of VCP induces preferential accumulation of αTCR with less mannose residues, suggesting its retention within the ER. Mass spectrometric analysis of cellular N-linked glycans revealed that depletion of VCP decreases the level of high mannose glycoproteins, increases the levels of truncated low-mannose glycoproteins and induces changes in the abundance of complex glycans assembled in post-ER compartments. Since proteasome inhibition was unable to mimic those changes, they can not be regarded as a simple consequence of inhibited ERAD but represent a complex effect of VCP on the function of the ER.
“…Retention in the ER and subsequent breakdown of αTCR in the absence of other TCR subunits is one of the best studied examples of ERAD [5][6][7]12,20,[38][39][40][41][42][43][44][45]. ERAD is generally regarded as a UPS-dependent process requiring VCP Ufd1-Npl4 for retrotranslocation of substrates from the ER into the cytosol [19,25,26,46].…”
Section: Discussionmentioning
confidence: 99%
“…It is not known what specific structural feature or association with what protein triggers αTCR ubiquitination, but it is required not only for its targeting to the 26S proteasomes, but also for its retrotranslocation from the ER [11,12]. Ubiquitination of αTCR is mediated by at least two different ubiquitin ligases (E3s): cytosolic SCF Fbs1,2 which recognizes N-linked oligosaccharides attached to dislocated αTCR chain [13] and ER-membrane associated HRD1 [14].…”
Summaryα chain of T-cell receptor (TCR) is a typical ERAD (ER-associated degradation) substrate degraded in the absence of other TCR subunits. Depletion of derlin1 fails to induce accumulation of αTCR despite inducing accumulation of α1-antitrypsin, another ERAD substrate. Furthermore, while depletion of VCP does not affect levels of α1-antitrypsin, it induces an increase in levels of αTCR. RNAi of VCP induces preferential accumulation of αTCR with less mannose residues, suggesting its retention within the ER. Mass spectrometric analysis of cellular N-linked glycans revealed that depletion of VCP decreases the level of high mannose glycoproteins, increases the levels of truncated low-mannose glycoproteins and induces changes in the abundance of complex glycans assembled in post-ER compartments. Since proteasome inhibition was unable to mimic those changes, they can not be regarded as a simple consequence of inhibited ERAD but represent a complex effect of VCP on the function of the ER.
“…In contrast, a truncated form with the putative SP and the PA domain removed was evenly distributed in the whole cell ( Figure 1E2). More convincingly, GFP-Rnf133 co-localized with the RFP-tagged E2 conjugating enzyme MmUbc6, an endoplasmic reticulum (ER)-localized protein [7] ( Figure 1F). These data indicated that Rnf133 was most likely an ER-associated protein.…”
Spermatogenesis, the process by which sperms are generated within the male gonads, involves a number of events that occur only in the testis. Examples include the nucleus condensation as a result of histone sequential replacement by transition proteins 1, 2 and protamin, the formation of sperm-specific organelles such as acrosomes and sperm tails, and the shedding of majority of the cytoplasm as residual bodies. To support the accomplishment of these events, it is hypothesized that a large number of testis-specific genes need to be expressed, which is consistent with the estimation that about 4% of the genes in the mouse genome are specifically expressed in the testis [1]. Identification of these genes and their biological functions will not only help us to elucidate the mechanisms of spermatogenesis but also provide potential targets for novel non-hormonal contraceptive drugs [2].In this study, we identified a potential testis-specific gene named Rnf133 (NCBI: Mm.436547). It belongs to the RING finger protein (RNF) family, whose members are very divergent in terms of their sequences and functions except for sharing a RING domain (CX2CX(9-39)CX(1-3)HX(2-3)C/HX2CX(4-48)CX2C) [3]. A number of RNFs have been reported to be expressed in the testis, but their functions are poorly understood [4]. Multiple sequence alignment of Rnf133 proteins from five mammalian species (Mus musculus, Homo sapiens, Pan troglodytes, Rattus norvegicus, Macaca mulatta) indicated that they are highly conserved (~70% identity among all species, Supplementary information, Figure S1). All these proteins possess a C3H2C3 RING finger domain, a protease-associated (PA) domain, a signal peptide (SP) and a transmembrane (TM) domain. These features are typical of the GREUL (for Goliath Related E3 Ubiquitin Ligase) proteins, a group of RNFs with some of its members being identified as E3 ubiquitin ligases [5].Northern blotting analysis of 14 adult mouse tissues indicated that Rnf133 was detected only in the testis ( Figure 1A). RT-PCR results indicated that Rnf133 mRNA started to appear in the testis of day 21 mice and increased dramatically from day 28 and thereafter ( Figure 1B). As round spermatids appear by day 21 during spermatogenesis in mice, Rnf133 seemed to be expressed by round spermatids. This was supported by the results of in situ hybridization in which strong signals were detected in the adluminal regions of the seminiferous tubules where haploid germ cells are located ( Figure 1C). The interesting observation that signal was not observed in all of the seminiferous tubules strongly implied stage-specific expression of Rnf133 during spermatogenesis. Indeed, immunohistochemical staining using a rabbit polyclonal antiserum developed against the region from aa 209 to aa 382 (see the Supplementary information, Materials and Methods for procedures of the production of the antiserum and Figure S2 for its specificity characterization) revealed that Rnf133 was present in the cytoplasm of the step 14-16 elongated spermatids in the stage II-VI ...
“…ERAD constitutively counteracts ER stress, eliminating misfolded proteins from the ER, but it is further activated as part of UPR (Casagrande et al, 2000;Friedlander et al, 2000). Expression of individual TCR subunits in cell lines which endogenously do not express TCR have served in numerous studies to resolve the molecular determinants for rapid degradation of free TCR subunits (Bonifacino et al, 1989;Bonifacino et al, 1990;Fang et al, 2001;Fayadat and Kopito, 2003;Huppa and Ploegh, 1997;Lenk et al, 2002;Tiwari and Weissman, 2001;Travers et al, 2000;Wileman et al, 1990;Wileman et al, 1993;Yang et al, 1998;Yu et al, 1997;Yu and Kopito, 1999). αTCR is a type I transmembrane protein with a short cytoplasmic tail of 5 amino acids, which is dislocated from the ER, deglycosylated and degraded in the cytosol by proteasomes (Huppa and Ploegh, 1997;Yang et al, 1998;Yu et al, 1997).…”
Section: Introductionmentioning
confidence: 99%
“…αTCR is a type I transmembrane protein with a short cytoplasmic tail of 5 amino acids, which is dislocated from the ER, deglycosylated and degraded in the cytosol by proteasomes (Huppa and Ploegh, 1997;Yang et al, 1998;Yu et al, 1997). Ubiquitination of αTCR is required not only for its targeting to the 26S proteasomes, but also for its retrotranslocation from the ER (Thrower et al, 2000;Tiwari and Weissman, 2001). …”
HeLa cells stably expressing the α chain of T-cell receptor (αTCR), a model substrate of ERAD (ERassociated degradation), were used to analyze the effects of BiP/Grp78 depletion by the SubAB cytotoxin. SubAB induced XBP1 splicing, followed by JNK phosphorylation, eIF2α phosphorylation, upregulation of ATF3/4 and partial ATF6 cleavage. Other markers of ER stress, including elements of ER-associated degradation (ERAD) pathway, as well as markers of cytoplasmic stress, were not induced. SubAB treatment decreased absolute levels of αTCR, which was caused by inhibition of protein synthesis. At the same time, the half-life of αTCR was extended almost fourfold from 70 min to 210 min, suggesting that BiP normally facilitates ERAD. Depletion ofp97/VCP partially rescued SubAB-induced depletion of αTCR, confirming the role of VCP in ERAD of αTCR. It therefore appears that ERAD of αTCR is driven by at least two different ATPase systems located at two sides of the ER membrane, BiP located on the lumenal side, while p97/ VCP on the cytoplasmic side. While SubAB altered cell morphology by inducing cytoplasm vacuolization and accumulation of lipid droplets, caspase activation was partial and subsided after prolonged incubation. Expression of CHOP/GADD153 occurred only after prolonged incubation and was not associated with apoptosis.
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