Mullerian Inhibiting Substance (MIS), a biological modifier that causes regression of Mullerian ducts in male embryos, is effective as a single agent in vitro and in vivo against human and mouse ovarian cancer cell lines expressing MIS type II receptor; however, little is known about how recombinant human MIS (rhMIS), now being scaled for preclinical trials, could be used in combination with cytotoxic or targeted chemotherapeutic agents. Mouse serous and endometrioid ovarian carcinoma cell lines were tested in vitro against rhMIS alone and with doxorubicin, paclitaxel, or cisplatin as agents in clinical use. Because MIS releases FK506 binding protein (FKBP12), which activates the mammalian target of rapamycin (mTOR) downstream of Akt, rhMIS and rapamycin combinations were tested. MIS increases p16 protein levels, and 5 -Aza-2 -deoxycytidine (AzadC) induces p16 mRNA; therefore, they were used in combination in vitro and in vivo with a human ovarian cancer cell line. A paclitaxel-resistant human ovarian cancer cell line and its parental line both respond to rhMIS in vitro. Additivity, synergy, or competition was observed with MIS and rapamycin, AzadC, doxorubicin, cisplatin, and paclitaxel, suggesting that MIS in combination with selective targeted therapies might achieve greater activity against ovarian cancer than the use of each individual agent alone. These assays and statistical analyses could be useful in selecting rhMIS and chemotherapeutic agent combinations that enhance clinical efficacy and reduce toxicity. For example, granulosa cell tumors can produce serum MIS at concentrations 1,000-fold higher (1, 2), and normal baby boys can produce MIS concentrations at least 60-fold higher, than those found in normal females (3), without apparent adverse outcomes. It is anticipated that exogenous recombinant human MIS (rhMIS) will be nontoxic as a single agent and that it can be used effectively in combination with chemotherapy drugs to lower their toxicity. We originally hypothesized that cancers of Mullerian origin that expressed MISRII could be targets for MIS treatment (4-9), focusing first on ovarian cancers because they are derived from an MISsensitive surface or coelomic epithelium (10) and have the worst prognosis of all female reproductive tumors. Furthermore, ovarian ascites cells are also accessible ex vivo to examine biomarkers that may predict their response and mechanisms of biologic effect. The idea that MIS could be used to treat epithelial ovarian cancer is predicted by the fact that the histology of the embryonic Mullerian ducts is recapitulated in the common ovarian adenocarcinomas that arise from the surface or coelomic epithelium, which in the embryo invaginates to form the Mullerian duct (11)(12)(13)(14).The discovery that abdominal ascites cells from Ͼ50% of Stage III or IV ovarian cancer patients bound rhMIS, expressed MISRII mRNA, and were inhibited by rhMIS when treated in ex vivo proliferation assays (4), makes it compelling to study MIS as a potential therapeutic agent. The availabilit...