More than 90,000 ion mobility spectrometer (IMS) are in use worldwide, mostly without coupling to chromatographic columns for pre-separation of the neutrals entering the ionization region of the IMS. Related to new application fields e.g. breath analysis or determination of volatile metabolites of cell cultures and bacteria/fungi an effective way for pre-separation is needed strongly. The acceptance of IMS within the analytical world will be enhanced by supplying automatic procedures for peak finding, referencing and database-related identification of the signals within IMS-Chromatograms. Some papers are available concerning the internal loop of relation of IMS signals between different instruments, alignment for automatic interpretation with respect of reference analytes used and interpolation within the different members of classes of analytes in case that some missed e.g. within a homologous row of chemicals. With respect to inter comparison of recent findings using MCC/IMS and GC/MS experiments effective alignment procedures are developed. In the present paper we describe a software tool making the visualization of the total ion current (TIC) from chromatograms of GC/MSD possible in direct relation to the corresponding IMS-Chromatogram of MCC/IMS. Thus, parallel measurements of e.g. samples of human breath using MCC/IMS and thermodesorption (TD)-GC/MSD become comparable directly. On the other hand, the direct identification and relation of so far unknown peaks found in IMS-Chromatograms will be supported using the TIC results of GC/MSD.