Abstract:Aedes aegypti (Linnaeus, 1762) is the main mosquito vector for dengue and other arboviral infectious diseases. Control of this important vector highly relies on the use of insecticides, especially pyrethroids. Nevertheless, the development of pyrethroid resistance is a major obstacle to mosquito/disease control worldwide. Here, we focused on the mutations in the target site of pyrethroid insecticides, voltage-sensitive sodium channel (Vssc), and found that Ae. aegypti collected from Vietnam has the L982W allel… Show more
“…We also have identified further polymorphisms, the majority in intronic regions, some in predicted splice regions or leading to synonymous changes, and only five non-synonymous amino acid substitutions in the ace-1 and vgsc genes. For example, the substitution V977L in the vgsc gene which is next to the previously reported L978W (position L982W in D. melanogaster) reported to confer resistance to pyrethroids [48,49]. There is also the synonymous PLOS NEGLECTED TROPICAL DISEASES variant in the ace-1 gene (T506T in Ae.…”
Section: Discussionmentioning
confidence: 88%
“…Four amino-acid substitutions (V977L, K1577T, N1595T, P1612H) were found in vgsc gene. Of interest is the substitution V977L as it is next to a known mutation, L978W, (homologous to position L982W in Drosophila melanogaster ), which is reported to confer resistance to pyrethroids [ 48 , 49 ].…”
Section: Resultsmentioning
confidence: 99%
“…For example, the substitution V977L in the vgsc gene which is next to the previously reported L978W (position L982W in D . melanogaster ) reported to confer resistance to pyrethroids [ 48 , 49 ]. There is also the synonymous variant in the ace-1 gene (T506T in Ae .…”
Aedes mosquito vectors transmit many viruses of global health concern, including dengue, chikungunya and Zika. These vector-borne viral diseases have a limited number of treatment options, and vaccines vary in their effectiveness. Consequently, integrated vector management is a primary strategy for disease control. However, the increasing emergence and spread of insecticide resistance is threatening the efficacy of vector control methods. Identifying mutations associated with resistance in vector populations is important to monitor the occurrence and evolution of insecticide resistance and inform control strategies. Rapid and cost-effective genome sequencing approaches are urgently needed. Here we present an adaptable targeted amplicon approach for cost-effective implementation within next generation sequencing platforms. This approach can identify single nucleotide polymorphisms (SNPs) and small insertions and deletions (indels) in genes involved in insecticide resistance in Aedes aegypti mosquitoes. We designed and tested eleven amplicons, which included segments of the ace-1 (carbamate target), the Voltage-Gated Sodium Channel (vgsc; pyrethroids, DDT and organochlorines), and rdl (dieldrin) genes; thereby covering established knockdown resistance (kdr) mutations (e.g., S989P, I1011M/V, V1016G/I and F1534C), with the potential to identify novel ones. The amplicon assays were designed with internal barcodes, to facilitate multiplexing of large numbers of mosquitoes at low cost, and were sequenced using an Illumina platform. Our approach was evaluated on 152 Ae. aegypti mosquitoes collected in Cabo Verde, an archipelago with a history of arbovirus outbreaks. The amplicon sequence data revealed 146 SNPs, including four non-synonymous polymorphisms in the vgsc gene, one in ace-1 and the 296S rdl mutation previously associated with resistance to organochlorines. The 296S rdl mutation was identified in 98% of mosquitoes screened, consistent with the past use of an organochlorine compound (e.g., DDT). Overall, our work shows that targeted amplicon sequencing is a rapid, robust, and cost-effective tool that can be used to perform high throughput monitoring of insecticide resistance.
“…We also have identified further polymorphisms, the majority in intronic regions, some in predicted splice regions or leading to synonymous changes, and only five non-synonymous amino acid substitutions in the ace-1 and vgsc genes. For example, the substitution V977L in the vgsc gene which is next to the previously reported L978W (position L982W in D. melanogaster) reported to confer resistance to pyrethroids [48,49]. There is also the synonymous PLOS NEGLECTED TROPICAL DISEASES variant in the ace-1 gene (T506T in Ae.…”
Section: Discussionmentioning
confidence: 88%
“…Four amino-acid substitutions (V977L, K1577T, N1595T, P1612H) were found in vgsc gene. Of interest is the substitution V977L as it is next to a known mutation, L978W, (homologous to position L982W in Drosophila melanogaster ), which is reported to confer resistance to pyrethroids [ 48 , 49 ].…”
Section: Resultsmentioning
confidence: 99%
“…For example, the substitution V977L in the vgsc gene which is next to the previously reported L978W (position L982W in D . melanogaster ) reported to confer resistance to pyrethroids [ 48 , 49 ]. There is also the synonymous variant in the ace-1 gene (T506T in Ae .…”
Aedes mosquito vectors transmit many viruses of global health concern, including dengue, chikungunya and Zika. These vector-borne viral diseases have a limited number of treatment options, and vaccines vary in their effectiveness. Consequently, integrated vector management is a primary strategy for disease control. However, the increasing emergence and spread of insecticide resistance is threatening the efficacy of vector control methods. Identifying mutations associated with resistance in vector populations is important to monitor the occurrence and evolution of insecticide resistance and inform control strategies. Rapid and cost-effective genome sequencing approaches are urgently needed. Here we present an adaptable targeted amplicon approach for cost-effective implementation within next generation sequencing platforms. This approach can identify single nucleotide polymorphisms (SNPs) and small insertions and deletions (indels) in genes involved in insecticide resistance in Aedes aegypti mosquitoes. We designed and tested eleven amplicons, which included segments of the ace-1 (carbamate target), the Voltage-Gated Sodium Channel (vgsc; pyrethroids, DDT and organochlorines), and rdl (dieldrin) genes; thereby covering established knockdown resistance (kdr) mutations (e.g., S989P, I1011M/V, V1016G/I and F1534C), with the potential to identify novel ones. The amplicon assays were designed with internal barcodes, to facilitate multiplexing of large numbers of mosquitoes at low cost, and were sequenced using an Illumina platform. Our approach was evaluated on 152 Ae. aegypti mosquitoes collected in Cabo Verde, an archipelago with a history of arbovirus outbreaks. The amplicon sequence data revealed 146 SNPs, including four non-synonymous polymorphisms in the vgsc gene, one in ace-1 and the 296S rdl mutation previously associated with resistance to organochlorines. The 296S rdl mutation was identified in 98% of mosquitoes screened, consistent with the past use of an organochlorine compound (e.g., DDT). Overall, our work shows that targeted amplicon sequencing is a rapid, robust, and cost-effective tool that can be used to perform high throughput monitoring of insecticide resistance.
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