“…One of the most common methods used to examine the clonality of such macrolide-resistant and -sensitive streptococcal isolates involves restriction of genomic DNA with the SmaI endonuclease, followed by pulsed field gel electrophoresis (PFGE) analysis (6,44,55). Recently, however, a number of epidemiological studies have reported that the DNA from a diverse group of erythromycin-resistant streptococci could not be digested with SmaI (7,22,35,36,44). This finding prompted the use of alternative restriction enzymes, such as ApaI, EagI, and SfiI, in the analysis, making it difficult subsequently to directly compare the clonalities of strains that differ in macrolide susceptibility and to relate the results of different epidemiological studies (7,35,36).…”