We have cloned the gene for a novel Ets-related transcription factor, new Ets-related factor (NERF), from human spleen, fetal liver, and brain. Comparison of the deduced amino acid sequence of NERF with those of other members of the Ets family reveals that the level of homology to ELF-1, which is involved in the regulation of several T-and B-cell-specific genes, is highest. Homologies are clustered in the putative DNA binding domain in the middle of the protein, a basic domain just upstream of this domain, and several shorter stretches of homology towards the amino terminus. The presence of two predominant NERF transcripts in various fetal and adult human tissues is due to at least three alternative splice products, NERF-1a, NERF-1b, and NERF-2, which differ in their amino termini and their expression in different tissues. Only NERF-2 and ELF-1, and not NERF-1a and NERF-1b, function as transcriptional activators of the lyn and blk gene promoters, although all isoforms of NERF bind with affinities similar to those of ELF-1 to a variety of Ets binding sites in, among others, the blk, lck, lyn, mb-1, and immunoglobulin H genes and are expressed at similar levels. Since NERF and ELF-1 are coexpressed in B and T cells, both might be involved in the regulation of the same genes.In our search for transcriptional regulators of B-cell differentiation we have observed that the majority of B-cell-specific genes contain ets-related enhancer elements in their regulatory regions (4). We, therefore, have focused on characterizing the members of the ets transcription factor/oncogene family which are involved in B-cell gene regulation. The ets gene family traces its history to oncogenes cloned from retroviruses (89). Since the time of this original cloning, more than 20 cellular homologs which function as transcription factors under physiological conditions and transform cells when aberrantly expressed have been cloned (36,89). All members of the Ets family share a highly conserved 80-to 90-amino-acid DNA binding domain, the Ets domain. The Ets domain is sufficient to interact specifically with DNA sequences, and because of the conserved DNA binding domain, binding sites for ets factors are all very similar, with a core binding motif, A/GGAA/T, and slight differences in flanking nucleotides for different ets factors (36,89). Outside the DNA binding domain very little homology is common to all members of the Ets family. Etsrelated proteins can be grouped into subclasses based on additional homologous domains unique for particular members of the Ets family (36, 89). Thus, for example, ERP, SAP-1, and ELK-1 are grouped together because of three homology regions outside the Ets domain which are not found in other members of the Ets family (16, 55).The role of ets factors in human carcinogenesis was recently established when several members of the Ets family were directly implicated in specific chromosomal translocations in different types of cancer. Ewing's sarcoma is characterized by translocations involving either erg, fli-1, or E...