Fluxes of major ions and nutrients were measured in the watershed-lake ecosystem of a strongly acidified lake, Plešné jezero (Plešné Lake), in the Czech Republic in hydrological years from 2001 through 2005. The lake is situated in a Norway spruce forest and has a steep watershed between elevations of 1090 and 1378 m. The average water input and output from the ecosystem was 1372 mm and 1157 mm (37 L km −2 s −1 ), respectively, and the water residence time averaged 306 days. Despite ecosystem recovery from acidification occurring since the late 1980s, the Plešné watershed was an average net source of 25 mmol SO ). Photochemical liberation from organic complexes was an additional in-lake source of Ali. The net in-lake retention or removal of total phosphorus, total nitrogen, and silica were on average 50%, 27%, and 23%, respectively. The lake was a net source of NH + 4 due to a cease in nitrification (pH < 5) and from NH + 4 production by dissimilation exceeding its removal by assimilation.