2020
DOI: 10.1039/d0ce00577k
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Electron density based analysis of N–H⋯OC hydrogen bonds and electrostatic interaction energies in high-resolution secondary protein structures: insights from quantum crystallographic approaches

Abstract:

Limiting values of the topological parameters and the electrostatic interaction energies to establish the presence of true N–H⋯OC H-bonds in protein main-chain have been identified using quantitative and qualitative analyses of electron densities.

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Cited by 9 publications
(8 citation statements)
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“…The peak at 4.38 (4.35) ppm assigned to the CH 2 connected to the tacn ring was transferred to 4.49 ppm and also greatly weakened with the addition of equimolar Fe 3+ ions. Usually, the electronic effect has a great influence on ortho-CH, and the chemical shift is larger than that of meta-CH and para-CH . We speculate that there may be electrostatic interaction between Fe 3+ and oxygen in the phenolic hydroxyl group .…”
Section: Resultsmentioning
confidence: 81%
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“…The peak at 4.38 (4.35) ppm assigned to the CH 2 connected to the tacn ring was transferred to 4.49 ppm and also greatly weakened with the addition of equimolar Fe 3+ ions. Usually, the electronic effect has a great influence on ortho-CH, and the chemical shift is larger than that of meta-CH and para-CH . We speculate that there may be electrostatic interaction between Fe 3+ and oxygen in the phenolic hydroxyl group .…”
Section: Resultsmentioning
confidence: 81%
“…Usually, the electronic effect has a great influence on ortho-CH, and the chemical shift is larger than that of meta-CH and para-CH. 46 We speculate that there may be electrostatic interaction between Fe 3+ and oxygen in the phenolic hydroxyl group. 47 Furthermore, combined with 1 H NMR spectroscopy of btacn (Figure S1) and [Zn(btacn)Cl] + (Figure S4), we infer that the expansion of the conjugated structure through the electrostatic interaction of PhH-O•••Fe 3+ is responsible for the luminescence enhancement.…”
Section: ■ Results and Discussionmentioning
confidence: 85%
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“…TAAM parametrized with values transferred from a pseudoatom databank allows to refine crystal structure with the same number of refined parameters as IAM, yet achieving better fit of the model to the data and more accurate structure. The databanks may also be used to reconstruct electron density of a molecule, crystal or biomacromolecular complex in fast yet quite accurate way and compute from it various properties, like electrostatic potential, electric field gradient, topological bonding descriptors, or energy of electrostatic interactions (Holstein et al, 2012;Malińska et al, 2014;Mandal et al, 2020;Zarychta et al, 2015).…”
mentioning
confidence: 99%