Excessive use of nitrogen fertilizer and inappropriate fertilization designs have negative results in agricultural ecosystems, such as considerable nitrogen losses through nitrogen dioxide (NO2) soil leaching and ammonia NH3 volatilization. In addition, climate change, with rising summer temperatures and reduced precipitation, leads to production declines and water shortages in the soil. This review aims to highlight the characteristics of natural zeolite and focus on their multiple uses in agriculture. These minerals are tectosilicates showing an open three-dimensional structure involving the cations required to balance the framework electrostatic charge of aluminum and silicon tetrahedral units. Different research groups reported more than fifty natural zeolites; chabazite, clinoptilolite, phillipsite, erionite, stilbite, heulandite, and mordenite are the most well-known. Zeolites are great tools to help the farmer and agronomist cope with several issues, such as soil or water pollution, contamination by heavy metals, loss of nutrients, and loss of water-use efficiency (WUE) of drylands. These natural crystalline aluminosilicates are considered soil conditioners to improve soil chemical and physical properties, such as saturated hydraulic conductivity (Ks), infiltration rate, cation exchange capacity (CEC), and water-holding capacity (WHC). Owing to their properties, these materials are able to reduce nitrate leaching and ammonia volatilization. Zeolites are also known for their carrying capacity of slow-release macronutrients, micronutrients, and fertilizers. However, the potential of these materials in agricultural areas is apparent, and zeolites show the promise of contributing directly to improve agricultural ecosystems as a sustainable product.