The effects of the AY gene on the normal development were investigated by using a inbred strain of C57BLi6 (ah) and its congenic strain of C57BU6-Ay (A%) mice.Three mating groups (female X male), i.e., group I, ala x ala; group 11, aia X Apia; and group 111, A% X aia, were set, and the rating of normal development was compared among the groups on gestation days 13, 14, 15 or 16 with special attention to the secondary palate. On day 13, the palates were wide-open and the palatal shelves were vertical in all embryos in all groups. In group I, both shelves became horizontal in 63.3% of the embryos on day 14. The incidences of embryos having completely closed palates were 95.8% and 100% on days 15 and 16, respectively. In group 11, in which half of the embryos were expected to carry the AY gene, the frequencies of shelf horizontalization on day 14 (31.1%) and of the complete closure on day 15 (74.3%) were significantly lowered as compared with those in group I, although the external morphological rating was comparable. On day 16, however, the palatal closure was completed in almost all embryos. In group 111, in which maternal mice as well as half of their embryos carried the AY gene, the external morphological rating was delayed as compared with that in either group I or 11, and the frequencies of shelf horizontalization on day 14 and of the complete closure on day 15 were as low as 10.9% and 39.6%, respectively. The palatal closure was not yet completed in 15.3% of the embryos on day 16. These results indicate that the AY gene causes a delay in shelf horizontalization and closure of the secondary palate of mouse embryos as compared with the a gene.