Obesity and overnutrition during pregnancy affect fetal programming of adult disease. Children born after maternal bariatric gastrointestinal bypass surgery (AMS) are less obese and exhibit improved cardiometabolic risk profiles carried into adulthood compared with siblings born before maternal surgery (BMS). This study was designed to analyze the impact of maternal weight loss surgery on methylation levels of genes involved in cardiometabolic pathways in BMS and AMS offspring. Differential methylation analysis between a sibling cohort of 25 BMS and 25 AMS (2-25 y-old) offspring from 20 mothers was conducted to identify biological functions and pathways potentially involved in the improved cardiometabolic profile found in AMS compared with BMS offspring. Links between gene methylation and expression levels were assessed by correlating genomic findings with plasma markers of insulin resistance (fasting insulin and homeostatic model of insulin resistance). A total of 5,698 genes were differentially methylated between BMS and AMS siblings, exhibiting a preponderance of glucoregulatory, inflammatory, and vascular disease genes. Statistically significant correlations between gene methylation levels and gene expression and plasma markers of insulin resistance were consistent with metabolic improvements in AMS offspring, reflected in genes involved in diabetes-related cardiometabolic pathways. This unique clinical study demonstrates that effective treatment of a maternal phenotype is durably detectable in the methylome and transcriptome of subsequent offspring.developmental origins | epigenetics | intrauterine environment | glucose metabolism | adiposity C hildhood overweight and obesity have increased dramatically in recent decades (1). Parental obesity increases the risk of obesity in offspring through genetic, biological, and environmental influences evident in associations between maternal body mass index (BMI), offspring adiposity, and cardiovascular disease (CVD) risk factors (2-4). Maternal obesity, weight gain, increased interpregnancy BMI, and gestational diabetes all increase risks of offspring obesity and type 2 diabetes mellitus (T2DM) (5, 6). Several genetic studies of nutritional response and metabolic control support the hypothesis that specific epigenetic changes contribute to early nutritional fetal programming, increasing the risk of metabolic disorders later in life (7-9).The intrauterine environment including nutritional factors, toxic exposures, and maternal stress participates in fetal programming (10). Maternal diet and adiposity impact methylation levels affecting specific gene functions. Prenatal exposure to famine during the Dutch hunger winter of 1944 is associated with obesity with less DNA methylation ("undermethylation") of the imprinted insulin-like growth factor 2 (IGF2) gene in exposed offspring relative to their unexposed siblings (11). Recently, retinoid X receptor alpha (RXRA) promoter methylation was demonstrated to correlate with increased adiposity in two independent cohorts of ch...