Background
Alport syndrome (AS) is a chronic progressive kidney failure and extra renal organ damage caused by COL4A3,COL4A4 and COL4A5 mutations. AS is inherited in three ways: X-linked dominantly, autosomally recessively, and autosomally dominantly. The COL4A3 and COL4A4 mutations induce autosomal recessive AS (ARAS).
Methods
We initially discerned a splicing mutation of COL4A3 utilizing next-generation sequencing in this study. Following that, we used bioinformatics,renal biopsy pathology and in vitro minigene experiment, complementary analysis of clinical data was carried out, and the expression and function of variants were expounded to verify the pathogenicity of potential pathogenic variants.
Results
A splicing mutation (c.687+1G>T) in intron 12 of COL4A3 was found in a Chinese
family; Sanger sequencing indicated its association with the illness. Bioinformatics analysis revealed its impact on splicing, causing a frame-shift during nucleic acid translation, confirmed in vitro minigene assay. The proband's glomerular basement membrane (GBM) displayed reduced type IV collagen α3, α4, and α5 chains, some absent, suggesting disruption of collagen IV trimers in the GBM, potentially damaging the glomerular filtration barrier(GFB).
Conclusions
We present a novel finding of a previously unreported c.687+1G>T mutation in COL4A3, disrupting transcription and translation, impairing α3α4α5 chain trimer formation in type IV collagen. This alters GBM integrity, causing hereditary AS. This discovery enriches the AS genetic map, aiding clinical genetic guidance and enhancing pregnancy testing efficacy.