Tree thinning affects the light environment, which in turn affects the growth and survival of understory vegetation, thus improving species diversity and nutrient cycling, as well as the ecological habitat factors. However, the response of understory vegetation to the thinning intensity and short-time effects in the temperate broadleaf-conifer mixed forest is not completely clear. In this study, four permanent plots with a total area of 4 hm2 were established in a mixed broadleaf-conifer forest in northeast China, with thinning intensities of 20% (light thinning, LT), 35% (medium thinning, MT), 55% (heavy thinning, HT) and the unthinned plot (CK), respectively, in accordance with the basal area. The responses of species diversity to changes in understory vegetation were conducted by a structural equation model (SEM). The results showed that compared with CK, thinning significantly increased the photosynthetically active radiation (PAR) and the light quality (R/FR) (p < 0.05), while decreased the contents of soil total nitrogen (TN), total phosphorous (TP), organic matter (OM), nitrate nitrogen (NN), ammonia nitrogen (AN) and pH. The degree of fragmentation of light factors among the treatment plots gradually decreased as thinning intensity increased. Among all the thinning treatments, PAR and R/FR were found to be the optimal light condition when the forest thinning intensity was 55%. The light condition was found to have a significant negative correlation with soil TN, TP, OM, and AN. While the soil nutrients were positively correlated with herbaceous layer diversity but negatively correlated with shrub layer diversity. The soil nutrients were lost after thinning in a short time and herb diversity decreased, but shrub diversity increased significantly compared with unthinned plots. For the understory vegetation, the species diversity of shrub and herb layer were showed to be more sensitive to soil nutrients than light environment.