Accurate determination of the antimicrobial susceptibilities of clinical isolates is important in establishing adequate treatment with antibiotics, particularly for infections caused by multiple drug-resistant strains of Pseudomonas aeruginosa. However, current laboratory antimicrobial susceptibility testing is affected by various conditions, including cation concentrations. In this study, we analyzed the relevance of the resistance determinants, metallo-lactamase (MBL) and aminoglycoside-modifying enzyme production, and examined the effects of calcium concentration on the in vitro activity of antibiotics. The broth microdilution method using Mueller-Hinton broth supplemented with various concentrations of calcium (5.2, 25, and 50 mg/L) was used to evaluate 58 clinical strains of P. aeruginosa. We observed increases in the minimum inhibitory concentrations (MICs) of aminoglycosides, tetracyclines, quinolones, and somelactam antibiotics with higher concentrations of calcium in the media. Strains that did not produce MBLs would have been affected by calcium concentration. Strains that did not produce aminoglycoside-modifying enzymes tended to lower the MICs of aminoglycosides more substantially than strains that produced aminoglycoside-modifying enzymes. In conclusion, the calcium concentration of the media may affect the results of antimicrobial susceptibilities of P. aeruginosa in relation to each resistance gene.