Abstract:To achieve a bio-based economy, it is necessary to consider variability within a feedstock population. We must understand the range of key phenotypic characteristics when selecting economically advantageous genotypes for domestication in an optimized supply chain. In this analysis we measured cell-wall composition traits in a large natural variant population of Populus trichocarpa. The results were combined with agronomic growth data from the matching genotype to conduct various techno-economic analyses, evalu… Show more
“…More recently, our study that controlled for technical and micro-spatial error on several controlled crosses in Populus trichocarpa were similar: H 2 was 0.56 for lignin content and 0.81 for the S/G ratio (Harman-Ware et al, 2021). Correlations between C5 and C6 sugars, lignin content, and S/G ratio have been observed in P. trichocarpa (Guerra et al, 2016;Happs et al, 2021); for example, lignin and the S/G ratio displayed a moderate positive correlation (r g = 0.37). Other phenotypes such as enzymatic sugar release (a biomass recalcitrance metric) have also shown correlations with biomass composition phenotypes such as S/G ratio, as demonstrated recently in willow (r p = ∼0.4) (Ohlsson et al, 2019).…”
Section: Introductionsupporting
confidence: 59%
“…In total, 924 P. trichocarpa natural accessions were grown in OR, United States, and sampled as described previously (Muchero et al, 2015;Chhetri et al, 2019;Happs et al, 2020). In brief, increment cores from 3-year-old trees were debarked, dried, and milled.…”
Section: Populus Trichocarpa Sample Collectionmentioning
confidence: 99%
“…Biomass that had been dried, debarked, milled, and sieved to −20/+80 mesh, ethanol extracted, and destarched was used to determine cell wall sugar composition using high-throughput hydrolysis followed by the NMR analysis of hydrolyzates based on methods described previously (Sluiter et al, 2011;Gjersing et al, 2013;Happs et al, 2021). This method was chosen as it was able to quickly obtain the sugar composition of biomass to build models for sugar prediction by py-MBMS and for the validation of sugar composition estimates.…”
Section: Sugar Composition Analysismentioning
confidence: 99%
“…Currently, there is a need to utilize rapid techniques capable of analyzing large datasets to determine the sugar composition derived from cellulose and hemicelluloses in biomass in an effort to inform systems biology models, to develop sustainable and consistent feedstocks, and to inform field-to-fuel insights to track changes in biomass composition. The high-throughput analysis of cell wall sugars in lignocellulosic biomass is difficult to achieve as typical methodologies require many steps, including hydrolysis, prior to the analysis of released sugars by high-performance liquid chromatography (HPLC) or nuclear magnetic resonance (NMR; Sluiter et al, 2011;Happs et al, 2020). Various types of high-throughput methods have been developed to estimate sugar composition in biomass and typically involve the use of hydrolysis steps, robotics, and plate reading technology (Decker et al, 2018).…”
Section: Introductionmentioning
confidence: 99%
“…Various types of high-throughput methods have been developed to estimate sugar composition in biomass and typically involve the use of hydrolysis steps, robotics, and plate reading technology (Decker et al, 2018). Gjersing et al (2013) and Happs et al (2021) have developed high-throughput methods for the determination of sugar content in biomass by means of hydrolysis followed by the analysis of hydrolyzates using NMR. The NMR analysis of biomass hydrolyzates is capable of estimating the composition of major and minor sugars present in lignocellulosic biomass cell walls but is still limited in throughput by laborious hydrolysis steps prior to the rapid analysis of the products on the spectrometer.…”
The rapid analysis of biopolymers including lignin and sugars in lignocellulosic biomass cell walls is essential for the analysis of the large sample populations needed for identifying heritable genetic variation in biomass feedstocks for biofuels and bioproducts. In this study, we reported the analysis of cell wall lignin content, syringyl/guaiacyl (S/G) ratio, as well as glucose and xylose content by high-throughput pyrolysis-molecular beam mass spectrometry (py-MBMS) for >3,600 samples derived from hundreds of accessions of Populus trichocarpa from natural populations, as well as pedigrees constructed from 14 parents (7 × 7). Partial Least Squares (PLS) regression models were built from the samples of known sugar composition previously determined by hydrolysis followed by nuclear magnetic resonance (NMR) analysis. Key spectral features positively correlated with glucose content consisted of m/z 126, 98, and 69, among others, deriving from pyrolyzates such as hydroxymethylfurfural, maltol, and other sugar-derived species. Xylose content positively correlated primarily with many lignin-derived ions and to a lesser degree with m/z 114, deriving from a lactone produced from xylose pyrolysis. Models were capable of predicting glucose and xylose contents with an average error of less than 4%, and accuracy was significantly improved over previously used methods. The differences in the models constructed from the two sample sets varied in training sample number, but the genetic and compositional uniformity of the pedigree set could be a potential driver in the slightly better performance of that model in comparison with the natural variants. Broad-sense heritability of glucose and xylose composition using these data was 0.32 and 0.34, respectively. In summary, we have demonstrated the use of a single high-throughput method to predict sugar and lignin composition in thousands of poplar samples to estimate the heritability and phenotypic plasticity of traits necessary to develop optimized feedstocks for bioenergy applications.
“…More recently, our study that controlled for technical and micro-spatial error on several controlled crosses in Populus trichocarpa were similar: H 2 was 0.56 for lignin content and 0.81 for the S/G ratio (Harman-Ware et al, 2021). Correlations between C5 and C6 sugars, lignin content, and S/G ratio have been observed in P. trichocarpa (Guerra et al, 2016;Happs et al, 2021); for example, lignin and the S/G ratio displayed a moderate positive correlation (r g = 0.37). Other phenotypes such as enzymatic sugar release (a biomass recalcitrance metric) have also shown correlations with biomass composition phenotypes such as S/G ratio, as demonstrated recently in willow (r p = ∼0.4) (Ohlsson et al, 2019).…”
Section: Introductionsupporting
confidence: 59%
“…In total, 924 P. trichocarpa natural accessions were grown in OR, United States, and sampled as described previously (Muchero et al, 2015;Chhetri et al, 2019;Happs et al, 2020). In brief, increment cores from 3-year-old trees were debarked, dried, and milled.…”
Section: Populus Trichocarpa Sample Collectionmentioning
confidence: 99%
“…Biomass that had been dried, debarked, milled, and sieved to −20/+80 mesh, ethanol extracted, and destarched was used to determine cell wall sugar composition using high-throughput hydrolysis followed by the NMR analysis of hydrolyzates based on methods described previously (Sluiter et al, 2011;Gjersing et al, 2013;Happs et al, 2021). This method was chosen as it was able to quickly obtain the sugar composition of biomass to build models for sugar prediction by py-MBMS and for the validation of sugar composition estimates.…”
Section: Sugar Composition Analysismentioning
confidence: 99%
“…Currently, there is a need to utilize rapid techniques capable of analyzing large datasets to determine the sugar composition derived from cellulose and hemicelluloses in biomass in an effort to inform systems biology models, to develop sustainable and consistent feedstocks, and to inform field-to-fuel insights to track changes in biomass composition. The high-throughput analysis of cell wall sugars in lignocellulosic biomass is difficult to achieve as typical methodologies require many steps, including hydrolysis, prior to the analysis of released sugars by high-performance liquid chromatography (HPLC) or nuclear magnetic resonance (NMR; Sluiter et al, 2011;Happs et al, 2020). Various types of high-throughput methods have been developed to estimate sugar composition in biomass and typically involve the use of hydrolysis steps, robotics, and plate reading technology (Decker et al, 2018).…”
Section: Introductionmentioning
confidence: 99%
“…Various types of high-throughput methods have been developed to estimate sugar composition in biomass and typically involve the use of hydrolysis steps, robotics, and plate reading technology (Decker et al, 2018). Gjersing et al (2013) and Happs et al (2021) have developed high-throughput methods for the determination of sugar content in biomass by means of hydrolysis followed by the analysis of hydrolyzates using NMR. The NMR analysis of biomass hydrolyzates is capable of estimating the composition of major and minor sugars present in lignocellulosic biomass cell walls but is still limited in throughput by laborious hydrolysis steps prior to the rapid analysis of the products on the spectrometer.…”
The rapid analysis of biopolymers including lignin and sugars in lignocellulosic biomass cell walls is essential for the analysis of the large sample populations needed for identifying heritable genetic variation in biomass feedstocks for biofuels and bioproducts. In this study, we reported the analysis of cell wall lignin content, syringyl/guaiacyl (S/G) ratio, as well as glucose and xylose content by high-throughput pyrolysis-molecular beam mass spectrometry (py-MBMS) for >3,600 samples derived from hundreds of accessions of Populus trichocarpa from natural populations, as well as pedigrees constructed from 14 parents (7 × 7). Partial Least Squares (PLS) regression models were built from the samples of known sugar composition previously determined by hydrolysis followed by nuclear magnetic resonance (NMR) analysis. Key spectral features positively correlated with glucose content consisted of m/z 126, 98, and 69, among others, deriving from pyrolyzates such as hydroxymethylfurfural, maltol, and other sugar-derived species. Xylose content positively correlated primarily with many lignin-derived ions and to a lesser degree with m/z 114, deriving from a lactone produced from xylose pyrolysis. Models were capable of predicting glucose and xylose contents with an average error of less than 4%, and accuracy was significantly improved over previously used methods. The differences in the models constructed from the two sample sets varied in training sample number, but the genetic and compositional uniformity of the pedigree set could be a potential driver in the slightly better performance of that model in comparison with the natural variants. Broad-sense heritability of glucose and xylose composition using these data was 0.32 and 0.34, respectively. In summary, we have demonstrated the use of a single high-throughput method to predict sugar and lignin composition in thousands of poplar samples to estimate the heritability and phenotypic plasticity of traits necessary to develop optimized feedstocks for bioenergy applications.
Economically viable
production of biobased products and
fuels requires
high-yielding, high-quality, sustainable process-advantaged crops,
developed using bioengineering or advanced breeding approaches. Understanding
which crop phenotypic traits have the largest impact on biofuel economics
and sustainability outcomes is important for the targeted feedstock
crop development. Here, we evaluated biomass yield and cell-wall composition
traits across a large natural variant population of switchgrass (Panicum virgatum L.) grown across three common garden sites.
Samples from 331 switchgrass genotypes were collected and analyzed
for carbohydrate and lignin components. Considering plant survival
and biomass after multiple years of growth, we found that 84 of the
genotypes analyzed may be suited for commercial production in the
southeastern U.S. These genotypes show a range of growth and compositional
traits across the population that are apparently independent of each
other. We used these data to conduct techno-economic analyses and
life cycle assessments evaluating the performance of each switchgrass
genotype under a standard cellulosic ethanol process model with pretreatment,
added enzymes, and fermentation. We find that switchgrass yield per
area is the largest economic driver of the minimum fuel selling price
(MSFP), ethanol yield per hectare, global warming potential (GWP),
and cumulative energy demand (CED). At any yield, the carbohydrate
content is significant but of secondary importance. Water use follows
similar trends but has more variability due to an increased dependence
on the biorefinery model. Analyses presented here highlight the primary
importance of plant yield and the secondary importance of carbohydrate
content when selecting a feedstock that is both economical and sustainable.
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