Huntington disease (HD) is a neurodegenerative disease caused by CAG repeat expansion in the HTT gene and involves a complex web of pathogenic mechanisms. Mutant HTT disrupts transcription, interferes with immune and mitochondrial function, and is aberrantly modified post-translationally.Evidence suggests that the mHTT RNA is toxic, and at the DNA level, somatic CAG repeat expansion in vulnerable cells influences disease course. Genome-wide association studies have identified DNA repair pathways as modifiers of somatic instability and disease course in HD and other repeat expansion diseases. In animal models of HD, nucleocytoplasmic transport is disrupted and its restoration is neuroprotective. Novel cerebrospinal fluid (CSF) and plasma biomarkers are amongst the earliest detectable changes in individuals with premanifest HD, and have the sensitivity to detect therapeutic benefit. Therapeutically, the first human trial of a HTT-lowering antisense oligonucleotide successfully, and safely, reduced CSF concentration of mHTT in individuals with HD. A larger trial, powered to detect clinical efficacy, is underway, along with trials of other HTT-lowering approaches. In this Review, we discuss new insights into the molecular pathogenesis of HD and future therapeutic strategies, including the modulation of DNA repair and targeting the DNA mutation itself.HD 57,58 . Furthermore, inducing autophagy increases mHTT clearance and improves the phenotype in animal models of the disease 59 . CNS inflammation has been implicated in several neurodegenerative diseases, including Alzheimer disease, Parkinson disease, multiple sclerosis, prion disease and amyotrophic lateral sclerosis 20,60,61 , although whether this inflammation is a primary pathogenic process or a response to other pathologies remains unclear. The levels of reactive microglia and proinflammatory mediators in the brain are higher in individuals with HD than in healthy controls 62,63 , and immune activation is also observed in the peripheral blood of individuals with the disease 61 .Mitochondria were implicated in HD pathogenesis after mitochondrial toxins, such as 3-nitropropionic acid, were found to cause selective death of striatal medium spiny neurons 64 . Mitochondrial ATP production, which is essential for the survival of neurons, is lower in postmortem brain samples from individuals with HD than in control samples 65 ; this observation is supported by evidence from animal and cell models of HD 47,66,67 . Mitochondrial ultrastructure is disrupted in the brains of individuals with HD 68 , and the number of mitochondria 69 and the activity of enzyme complexes [70][71][72] is lower than in controls. Furthermore, mitochondrial membrane potential is lower in lymphoblasts derived from individuals with HD than in lymphoblasts from controls 73,74 . Brain imaging studies showed that, in some brain regions, individuals with HD had lower levels of glucose metabolism and higher lactate concentration than healthy individuals [75][76][77][78] , which could be a result of...