The human stress response has evolved to maintain homeostasis under conditions of real or perceived stress. This objective is achieved through autoregulatory neural and hormonal systems in close association with central and peripheral clocks. The hypothalamic-pituitary-adrenal (HPA) axis is a key regulatory pathway in the maintenance of these homeostatic processes. The end product of this pathway-cortisol-is secreted in a pulsatile pattern, with changes in pulse amplitude creating a circadian pattern. During acute stress, cortisol levels rise and pulsatility is maintained. Although the initial rise in cortisol follows a large surge of adrenocorticotropic hormone (ACTH), if long-term inflammatory stress occurs, ACTH returns to near basal levels while cortisol remains raised as a result of increased adrenal sensitivity. In chronic stress, hypothalamic activation of the pituitary changes from corticotropin-releasing hormone dominant to arginine vasopressin dominant, and cortisol remains raised due at least in part to decreased cortisol metabolism. Acute elevations in cortisol are beneficial to promote survival of the fittest as part of the fight or flight response. However, chronic exposure to stress results in reversal of the beneficial effects with long-term cortisol exposure becoming maladaptive, which can lead to a broad range of problems, including the metabolic syndrome, obesity, cancer, mental health disorders, cardiovascular disease and increased susceptibility to infections. Neuroimmunoendocrine modulation in disease states and glucocorticoidbased therapeutics are also discussed.