The plastid terminal oxidase (PTOX) is distantly related to the mitochondrial alternative oxidase (AOX). Both are members of the diiron carboxylate quinol oxidase (DOX) class of proteins. PTOX and AOX contain 20 highly conserved amino acids, six of which are Fe-binding ligands. We have previously used in vitro and in planta activity assays to examine the functional importance of the Fe-binding sites. In this report, we conduct alanine-scanning mutagenesis on the 14 other conserved sites using our in vitro and in planta assay procedures. We found that the 14 sites fall into three classes: (i) Ala-139, Pro-142, Glu-171, Asn-174, Leu-179, Pro-216, Ala-230, Asp-287, and Arg-293 are dispensable for activity; (ii) Tyr-234 and Asp-295 are essential for activity; and (iii) Leu-135, His-151, and Tyr-212 are important but not essential for activity. Our data are consistent with the proposed role of some of these residues in active site conformation, substrate binding, and/or catalysis. Titration experiments showed that down-regulation of PTOX to ϳ3% of wild-type levels did not compromise plant growth, at least under ambient growth conditions. This suggests that PTOX is normally in excess, especially early in thylakoid membrane biogenesis.
Alternative oxidase (AOX)2 is a terminal oxidase that functions in the alternative pathway of mitochondrial respiration (1). It catalyzes the four-electron reduction of oxygen to water and branches from the cytochrome pathway at the level of the quinone pool (1-5). The alternative oxidase is found in two of the three domains of life, Bacteria and Eucarya, but not in Archaea; among Eucarya it is found in all kingdoms (i.e. plants, animals, fungi, protists) (4, 5). It is thought that AOX is activated when the cytochrome pathway becomes saturated, for instance, during oxidative stress when the inner membrane is highly energized and prone to the production of reactive oxygen species (ROS) (3, 6 -9).The IMMUTANS locus of Arabidopsis codes for a plastid homolog of AOX (10, 11). IM-like proteins have subsequently been found in a diverse array of plant, algal, and cyanobacterial species; IM does not appear to be present in animals (12). Also similar to AOX, IM functions as a terminal oxidase, transferring electrons from the plastoquinol (PQ) pool to molecular oxygen (13-17). IM is thus frequently designated "PTOX" (plastid terminal oxidase). (To avoid confusion, we will use the term PTOX in this report and IMMUTANS when describing the Arabidopsis gene for PTOX.) Current thinking is that PTOX is an important alternative electron sink in plastid membranes and that it lies at the intersection of many redox pathways. These include the desaturation reactions of carotenoid biosynthesis and chlororespiration (18,19). Reminiscent of AOX, PTOX has been hypothesized to serve as a "safety valve" for the dissipation of excess electron flow, e.g. during stress (20 -23). Consistent with this view, studies in tomato ghost (the ortholog of the Arabidopsis im mutant) reveal that lack of PTOX in young seedlings a...