Draft Genome Sequence of the Human-Pathogenic Bacterium Vibrio alginolyticus E0666

Cao, Yuan; Liu, Xiaofei; Zhang, He; Chen, Yingjian; Hu, Chengjin

doi:10.1128/genomea.00686-13

Cited by 2 publications

(1 citation statement)

References 9 publications

(6 reference statements)

Supporting

Mentioning

Contrasting

Order By: Relevance

“…That the only known representatives of V. antiquarius (939 and EX25) are taxonomic synonyms of V. diabolicus represents a significant shift in the systematics of these bacteria as both V. diabolicus and V. antiquarius were long regarded as distinct species ( Raguénès et al, 1997 ; Goudenège et al, 2014 ; Hasan et al, 2015 ). Yet the most striking synonym was V. alginolyticus E0666, which was isolated from spoiled horse mackerel associated with food poisoning ( Cao et al, 2013 ) and later shown to be virulent in a murine model ( Liu et al, 2013 ). The presence of virulence factors in V. antiquarius EX25, such as Ace and Zot, was described previously ( Hasan et al, 2015 ).…”

Section: Discussionmentioning

confidence: 99%

Comparative Genomic Analysis of Vibrio diabolicus and Six Taxonomic Synonyms: A First Look at the Distribution and Diversity of the Expanded Species

et al. 2018

View full text Add to dashboard Cite

Vibrio is a diverse genus of Gammaproteobacteria autochthonous to marine environments worldwide. Vibrio diabolicus and V. antiquarius were originally isolated from deep-sea hydrothermal fields in the East Pacific Rise. These species are closely related to members of the Harveyi clade (e.g., V. alginolyticus and V. parahaemolyticus) that are commonly isolated from coastal systems. This study reports the discovery and draft genome sequence of a novel isolate (Vibrio sp. 939) cultured from Pacific oysters (Crassostrea gigas). Questions surrounding the identity of Vibrio sp. 939 motivated a genome-scale taxonomic analysis of the Harveyi clade. A 49-genome phylogeny based on 1,109 conserved coding sequences and a comparison of average nucleotide identity (ANI) values revealed a clear case of synonymy between Vibrio sp. 939, V. diabolicus Art-Gut C1 and CNCM I-1629, V. antiquarius EX25 and four V. alginolyticus strains (E0666, FF273, TS13, and V2). This discovery expands the V. diabolicus species and makes available six additional genomes for comparative genomic analyses. The distribution of the expanded species is thought to be global given the range of isolation sources (horse mackerel, seawater, sediment, dentex, oyster, artemia and polycheate) and origins (China, India, Greece, United States, East Pacific Rise, and Chile). A subsequent comparative genomic analysis of this new eight-genome subclade revealed a high degree of individual genome plasticity and a large repertoire of genes related to virulence and defense. These findings represent a significant revision to the understanding of V. diabolicus and V. antiquarius as both have long been regarded as distinct species. This first look at the expanded V. diabolicus subclade suggests that the distribution and diversity of this species mirrors that of other Harveyi clade species, which are notable for their ubiquity and diversity.

show abstract

Section: Discussionmentioning

confidence: 99%

Comparative Genomic Analysis of Vibrio diabolicus and Six Taxonomic Synonyms: A First Look at the Distribution and Diversity of the Expanded Species

et al. 2018

View full text Add to dashboard Cite

show abstract

Ethnic seafood products sold on the Italian market: labelling assessment and biological, chemical and physical risk characterization

2019

View full text Add to dashboard Cite

Draft Genome Sequence of the Human-Pathogenic Bacterium Vibrio alginolyticus E0666

Abstract: Vibrio alginolyticus is a Gram-negative halophilic bacterium with worldwide distribution. In this work, we report the draft genome sequence of a V. alginolyticus strain (E0666) isolated from Epinephelus coioides ascites in the Shantou city of Guangdong Province, China.

Cited by 2 publications

References 9 publications

Comparative Genomic Analysis of Vibrio diabolicus and Six Taxonomic Synonyms: A First Look at the Distribution and Diversity of the Expanded Species

Comparative Genomic Analysis of Vibrio diabolicus and Six Taxonomic Synonyms: A First Look at the Distribution and Diversity of the Expanded Species

Ethnic seafood products sold on the Italian market: labelling assessment and biological, chemical and physical risk characterization

Contact Info

Product

Resources

About