Draft Genome Sequence of Herbaspirillum huttiense subsp.
            <i>putei</i>
            IAM 15032, a Strain Isolated from Well Water

Souza, Vanely; Piro, Vitor C.; Faoro, Helisson; Tadra-Sfeir, Michelle Z.; Chicora, Vanessa K.; Guizelini, Dieval; Weiss, Vinícius Almir; Vialle, Ricardo Assunção; Monteiro, Rose A.; Steffens, Maria; Marchaukoski, Jeroniza Nunes; Pedrosa, Fábio O.; Cruz, Leonardo M.; Chubatsu, Leda S.; Raittz, Roberto Tadeu

doi:10.1128/genomea.00252-12

Cited by 9 publications

(9 citation statements)

References 7 publications

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“…GW103 (23), Os34 (17), Os45 (18), IAM 15032 (19), CF444, YR522 (3), and JC206 (7) showed that all strains harbor genes for ammonium assimilation and cobalt-zinc-cadmium resistance. The genes for denitrification were found only in strains RV1423, GSF30 T , Os34, Os45, and SmR1.…”

Section: Genome Announcementmentioning

confidence: 99%

“…Only four Herbaspirillum genomes (those of H. lusitanum P6-12 [ 16 ], H. seropedicae Os34 [ 17 ] and Os45 [ 18 ], and H. huttiense subsp. putei IAM 15032 [ 19 ]) harbor two gentisate dioxygenase genes, and RV1432 harbors four gentisate dioxygenases.…”

Section: Genome Announcementmentioning

confidence: 99%

“…A comparison between the draft genome of RV1423 and the 10 genomes/draft genomes of the strains H. seropedicae SmR1 ( 22 ), P6-12 ( 16 ), Herbaspirillum frisingense GSF30 T ( 2 ), Herbaspirillum sp. GW103 ( 23 ), Os34 ( 17 ), Os45 ( 18 ), IAM 15032 ( 19 ), CF444, YR522 ( 3 ), and JC206 ( 7 ) showed that all strains harbor genes for ammonium assimilation and cobalt-zinc-cadmium resistance. The genes for denitrification were found only in strains RV1423, GSF30 T , Os34, Os45, and SmR1.…”

Section: Genome Announcementmentioning

confidence: 99%

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Draft Genome Sequence of the Naphthalene Degrader Herbaspirillum sp. Strain RV1423

et al. 2014

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Section: Genome Announcementmentioning

confidence: 99%

Section: Genome Announcementmentioning

confidence: 99%

Section: Genome Announcementmentioning

confidence: 99%

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Draft Genome Sequence of the Naphthalene Degrader Herbaspirillum sp. Strain RV1423

et al. 2014

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“…Sequenced Herbaspirillum species include plant growth promoting soil bacteria ( HGW103 ) from the rhizosphere of the grass Phragmites australis (Lee et al, 2012), isolates ( HlP6-12 ) from the root nodules of Phaseolus vulgaris (Weiss et al, 2012), strains ( HCF444 and HYR522 ) colonizing poplar (Brown et al, 2012), a strain ( HhIAM ) isolated from Japanese well water (De Souza et al, 2013) and an isolate ( HJC206 ) from human fecal flora (Lagier et al, 2012). …”

Section: Introductionmentioning

confidence: 99%

The genome of the endophytic bacterium H. frisingense GSF30T identifies diverse strategies in the Herbaspirillum genus to interact with plants

et al. 2013

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The diazotrophic, bacterial endophyte Herbaspirillum frisingense GSF30T has been identified in biomass grasses grown in temperate climate, including the highly nitrogen-efficient grass Miscanthus. Its genome was annotated and compared with related Herbaspirillum species from diverse habitats, including H. seropedicae, and further well-characterized endophytes. The analysis revealed that Herbaspirillum frisingense lacks a type III secretion system that is present in some related Herbaspirillum grass endophytes. Together with the lack of components of the type II secretion system, the genomic inventory indicates distinct interaction scenarios of endophytic Herbaspirillum strains with plants. Differences in respiration, carbon, nitrogen and cell wall metabolism among Herbaspirillum isolates partially correlate with their different habitats. Herbaspirillum frisingense is closely related to strains isolated from the rhizosphere of phragmites and from well water, but these lack nitrogen fixation and metabolism genes. Within grass endophytes, the high diversity in their genomic inventory suggests that even individual plant species provide distinct, highly diverse metabolic niches for successful endophyte-plant associations.

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“…De Souza et al [32] demonstrated the decrease of in vitro phosphate solubility and minimization of acetylene (low reduction in acetylene) in rice shoots by bacteria, including Herbaspirillum sp., Burkholderia sp., Pseudacidovorax, and Rhizobium sp. Therefore, non-N 2 fixation growth promotion mechanisms include an IAA development and improved nutrient balanced absorption.…”

Section: Relationship Between Pgpb and Rice Production Under Nutrientmentioning

confidence: 99%

Plant Growth-Promoting Bacteria as a Natural Resource for Sustainable Rice Production under the Soil Salinity, Wastewater, and Heavy Metal Stress

Mouhamad¹,

Alabboud²

2021

Plant Stress Physiology

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Rice is a cereal plant that is consumed in a grain form; however, its prolonged contact with irrigation wastewater might pose a threat to the consumers despite the following milling processes to eliminate the grain surface contamination which means that it needs further cooking to be suitable for human use. Additionally, excessive salt levels in wastewater can cause plant toxicity. Therefore, wastewater disposal can be handled by farm remediation. Rhizobacteria can also be used in this stressful environment to alleviate the problem by triggering a plant growthpromoting response (PGPR). The importance of promoting and biocontrol plant growth is based upon its long-term stability, as well as the numerous generated secondary metabolites, besides its ability to remove heavy metal. The current study revealed that PGPR allowed such toxic effects on sewage to encourage and define the characteristics of plant growth through urban environments.

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Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water

Abstract: Here we report the one-scaffold draft genome of Herbaspirillum huttiense subsp. putei strain 7-2T (IAM 15032), which was isolated from well water.

Cited by 9 publications

References 7 publications

Draft Genome Sequence of the Naphthalene Degrader Herbaspirillum sp. Strain RV1423

Draft Genome Sequence of the Naphthalene Degrader Herbaspirillum sp. Strain RV1423

The genome of the endophytic bacterium H. frisingense GSF30T identifies diverse strategies in the Herbaspirillum genus to interact with plants

Plant Growth-Promoting Bacteria as a Natural Resource for Sustainable Rice Production under the Soil Salinity, Wastewater, and Heavy Metal Stress

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