2013
DOI: 10.1038/ncomms3802
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Downsizing a human inflammatory protein to a small molecule with equal potency and functionality

Abstract: A significant challenge in chemistry is to rationally reproduce the functional potency of a protein in a small molecule, which is cheaper to manufacture, non-immunogenic, and also both stable and bioavailable. Synthetic peptides corresponding to small bioactive protein surfaces do not form stable structures in water and do not exhibit the functional potencies of proteins. Here we describe a novel approach to growing small molecules with protein-like potencies from a functionally important amino acid of a prote… Show more

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Cited by 33 publications
(71 citation statements)
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“…This study represents a major step toward understanding the molecular mechanism for activation of TLQP-21 and paves the way for designing new agonists/antagonists to modulate the function of the C3aR1 receptor (Reid et al, 2013). …”
Section: Discussionmentioning
confidence: 99%
“…This study represents a major step toward understanding the molecular mechanism for activation of TLQP-21 and paves the way for designing new agonists/antagonists to modulate the function of the C3aR1 receptor (Reid et al, 2013). …”
Section: Discussionmentioning
confidence: 99%
“…For instance, one of the benefits of utilizing small molecules is that they are unlikely to pose a significant issue regarding immunogenicity since their molecular sizes are too small to elicit an A c c e p t e d M a n u s c r i p t immune response effectively [197]. In addition, small molecules are often inexpensive and chemically stable when compared to recombinant protein growth factors [198]. It should be noted that the molecular weights of small molecules are less than 1,000 Daltons; therefore, many of them are able to diffuse into cells and interact with specific intracellular protein receptors.…”
Section: Small Molecule Deliverymentioning
confidence: 99%
“…For example, a hydrogen-bond accepting nitrogen conferred agonist activity, with much greater potency for imidazoles and oxazoles ( Figure 3) than for oxadiazoles, furans and other heterocycles. Interestingly, there was a linear correlation [9,10] between the C3aR-binding affinity (measured by competition with 125 I-C3a) and the calculated hydrogen-bond acceptor interaction energy (kcal mol -1 ) between water and heteroatom of heterocycles compared with the water dimer (determined using ab initio methods MP2/6-311++G(3d,3p) and corrected for the basis set superimposition error within Gaussian 09). This enabled us to tune agonist potency by rational variation of the heterocyclic component incorporated into the dipeptide mimetics, coupled with changes to other substituents.…”
Section: Fig 2 Heterocyclic Dipeptide Mimetics Derived From Dipeptimentioning
confidence: 99%
“…Here we summarize the principle and effectiveness of this idea, which starts with a functionally important amino acid in C3a and rationally grows it into functional surrogates for C3a. We compare activity profiles for the resulting peptidomimetics versus human C3a, all compounds binding to a specific G protein coupled receptor (C3aR) expressed on the plasma membrane surface of human immune and other cell types [9,10].…”
Section: Introductionmentioning
confidence: 99%