Background:
The biological role of microRNAs (miRNAs) in field cancerization is unknown. To investigate the involvement of miRNAs in gastric field cancerization, we evaluated the expression profile of ten miRNAs and their diagnostic value.
Methods:
We used three groups of FFPE gastric samples: non-cancer (NC), cancer adjacent (ADJ) and gastric cancer (GC). The expression profiles of
hsa-miR-10a
,
-miR-21, -miR-29c, -miR-135b
,
-miR-148a
,
-miR-150
,
-miR-204
,
-miR-215
,
-miR-483
and
-miR-664a
were investigated using qRT-PCR. The results obtained by qRT-PCR were validated in Small RNA-Seq data from the TCGA database. The search for target genes of the studied miRNAs was performed in the miRTarBase public database and miRTargetLink tool, using experimentally validated interactions. In addition, we also performed the functional analysis of these genes using enrichment in KEGG pathways. The potential as biomarker was evaluated using a receiver operating characteristic (ROC) curve and the derived area under the curve (AUC>0.85) analysis.
Results:
The miRNAs
hsa-miR-10a
,
-miR-21
,
-miR-135b
,
hsa-miR-148a
,
-miR-150
,
-miR-215
,
-miR-204
,
-miR-483
and
-miR-664a
were up-regulated in ADJ and GC compared to NC (
P
<0.03); and
hsa-miR-21
and
-miR-135b
were up-regulated in GC compared to ADJ (
P
<0.01).
Hsa-miR-148a
,
-miR-150
,
-miR-215
,
-miR-483
and
-miR-664a
were not differentially expressed between GC and ADJ, suggesting that both share similar changes (
P
>0.1). The TS-miR
hsa-miR-29c
was up-regulated in ADJ compared to NC and GC (
P
<0.01); we did not observe a significant difference in the expression of this miRNA between NC and GC. This feature may be an antitumor mechanism used by cancer-adjacent tissue because this miRNA regulates the
BCL-2
,
CDC42
and
DMNT3A
oncogenes. The expression level of
hsa-miR-204
was associated with
Helicobacter pylori
infection status (
P
<0.05)
.
Functional analysis using the genes regulated by the studied miRNAs showed that they are involved in biological pathways and cellular processes that are critical for the establishment of
H. pylori
infection and for the onset, development an...