Various physicochemical parameters (p , Hammett a, chemical shift, and ) of two series of substituted sulfonamides (IV'-phenyl and V'-pyridyl) have been correlated to their inhibitory activities in a cell-free folate-synthesizing system. The rate-determining steps for sulfonamide action in the cell-free system and a whole cell system were found to have similar substituent dependencies, indicating the likelihood of a common reaction. Comparison of the linear free energy relationships obtained in the two systems indicates that the common parabolic dependency of sulfonamide antibacterial activity is best explained by the Brueckner and Cowles theory rather than the more commonly used Bell and Roblin theory. Permeability of the bacteria to these sulfonamides in the whole cell system was found to be unimportant unless they were present in the ionized form to an extent greater than 90%. The data indicate that lipophilic factors-characterized by -are not important in the cell-free system, nor are they important in determining antibacterial in vitro activity when permeability is not limited by ionization.The relationship of the chemical structure of medicinal agents to their biological activity is a fundamental problem of science. Sulfonamides have played a leading role in our current understanding of this relationship. In a pioneering paper Woods1 recognized in 1940 that the antibacterial activities of sulfonamides were antagonized by the structurally similar compound, p-aminobenzoic acid (PABA).Bell and Roblin,2 Brueckner,3 and Cowles4 soon realized that the antibacterial activities were related to the acid dissociation constants of the sulfonamide groups. They postulated the existence of a critical 10 mM MgQ2; 50 mM 2-mercaptoethanol; 1 mM ATP; 20 µ PABA; 40 µ dihydropterin alcohol; sulfonamide as required; and 300 Mg