DNA barcoding approach to identification of Cassidula angulifera (Petit, 1841) (Mollusca: Gastropoda)

Saleky, Dandi; Merly, Sendy Lely

doi:10.46252/jsai-fpik-unipa.2021.vol.5.no.1.125

Cited by 5 publications

(5 citation statements)

References 3 publications

(5 reference statements)

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“…Cassidula secara ekologi terdistribusi luas di perairan tropis (Bremner, 2008), dan memiliki tingkat toleransi terhadap perubahan lingkungan (Amin et al, 2009). Beberapa penelitian sebelumnya melaporkan bahwa Cassidula banyak ditemukan sebagai penghuni tetap (native species) di ekosistem mangrove (Saleky dan Merly, 2021;Yuliawati et al, 2021). Jenis ini bersifat treefauna, banyak ditemukan pada akar Rhizophora (Merly et al, 2022), atau memanjat hingga bagian batang (Ariyanto et al, 2018).…”

Section: Metode Penelitianunclassified

Inventory Of Gastropods In The Coastal Area Of Desa Sungai Nibung West Kalimantan

Safitri,

Kushadiwijayanto,

Sofiana

et al. 2023

Barakuda45 J. Ilmu Perikanan dan Kelautan

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Desa Sungai Nibung is a village located in Teluk Pakedai District, Kubu Raya Regency, West Kalimantan. This village is one of the conservation areas established by the Regional Government of West Kalimantan Province in 2020. Desa Sungai Nibung has a high diversity of natural resources, one of which is gastropods. Gastropods are organisms that act as grazers, scavengers, and predators. These organisms can live in waters, coastal and terrestrial. Its diversity has been reported to be more than 75,000 species. Several gastropods have been used by the local community as food with a high protein source. Gastropods found on the coast of Sungai Nibung Village are Ellobium, Cassidula, Nerita, Neritina, Chicoreus, Cerithidea, Littoria, Potamopyrgus, and Onchidium.

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Section: Metode Penelitianunclassified

Inventory Of Gastropods In The Coastal Area Of Desa Sungai Nibung West Kalimantan

Safitri,

Kushadiwijayanto,

Sofiana

et al. 2023

Barakuda45 J. Ilmu Perikanan dan Kelautan

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“…Kemiripan morfologi tersebut dapat mengakibatkan terjadinya kesalahan identifikasi spesies (Khayra et al, 2016;Cahyono et al, 2018). Kesalahan identifikasi spesies cukup umum terjadi akibat dari bentuk morfologi ikan yang mirip (criptyc species) (Khedkar et al, 2014;Saleky & Merly, 2021).…”

Section: Pendahuluanunclassified

Identifikasi dan Analisis Filogenetik Ikan Ekonomis Penting Oreochromis sp. dengan Pendekatan DNA Barcoding

Sianturi

Dailami²,

Saleky³

2021

B : JIB

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Species identification is one of the most basic and important factors in fisheries management. Oreochromis sp., such as tilapia (Oreochromis mosambicus) and tilapia (Oreochromis niloticus) are introduced species of fish originating from outside Merauke which are now the dominant fish and are commonly found in inland waters of Merauke. The purpose of this study was to identify the economically important fish species Oreochromis sp. which landed at Merauke Traditional Market with DNA Barcoding approach. DNA amplification with the COI gene resulted in a DNA sequence length of 655 bp with the identification result being Tilapia (Oreochromis niloticus). Based on the phylogenetic tree data and genetic distance, the DNA sequences of the samples formed the same clade as the Oreochromis niloticus sequences from GeneBank with 0% genetic distance and it was estimated that these species came from the same parents. Identification with DNA Barcoding makes it easy to identify species quickly and accurately.

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“…The purpose of this study was to employ DNA barcoding to extract the COI gene's nucleotide sequence from Seluang fish from the Bumang River in Bangka (Saleky & Merly, 2021). This information may then be utilized to infer the fishes' genetic relationships.…”

Section: Introductionmentioning

confidence: 99%

DNA Barcoding of Brevibora cheeya from Bumang River, Bangka Island

Lestari,

Almagribi,

Lindiatika

et al. 2024

J. Lahan Suboptimal

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Brevibora cheeya is a cyprinid fish found in Bangka, Belitung, Sumatra, and Kalimantan. Bangka locals call this fish Seluang. This species is often considered Brevibora dorsiocellata due to its similar morphology. Molecular methods that have never been used for this species on Bangka Island can be used to confirm this species. This study uses COI genes (DNA barcoding) to molecularly identify Brevibora cheeya fish from Bangka Island and analyze their relationships. The sampling process was conducted in Bumang River, Bangka Island, in February 2023, and identification was conducted at the University of Bangka Belitung Biological Laboratory. NCBI BLAST and MEGA 11 were used for data analysis. The results showed that fish samples from Bangka Island have intraspecific genetic relatedness to B. cheeya from Belitung Island, Bangka Island, Central Kalimantan, and South Sumatra, with genetic distances ranging from 0% to 0.9%. The closest genetic relationship to Rasbora dorsiocellata is 3.2%. The phylogenetic tree showed a bootstrap value of 91 for relationships with the Bangka, Belitung, and Central Kalimantan databases and a bootstrap value of 95 for relationships with the Bangka and South Sumatra databases.

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DNA barcoding approach to identification of Cassidula angulifera (Petit, 1841) (Mollusca: Gastropoda)

Cited by 5 publications

References 3 publications

Inventory Of Gastropods In The Coastal Area Of Desa Sungai Nibung West Kalimantan

Inventory Of Gastropods In The Coastal Area Of Desa Sungai Nibung West Kalimantan

Identifikasi dan Analisis Filogenetik Ikan Ekonomis Penting Oreochromis sp. dengan Pendekatan DNA Barcoding

DNA Barcoding of Brevibora cheeya from Bumang River, Bangka Island

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