2020
DOI: 10.1038/s41467-020-16239-z
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Dissecting the cellular specificity of smoking effects and reconstructing lineages in the human airway epithelium

Abstract: Cigarette smoke first interacts with the lung through the cellularly diverse airway epithelium and goes on to drive development of most chronic lung diseases. Here, through single cell RNA-sequencing analysis of the tracheal epithelium from smokers and non-smokers, we generate a comprehensive atlas of epithelial cell types and states, connect these into lineages, and define cell-specific responses to smoking. Our analysis infers multi-state lineages that develop into surface mucus secretory and ciliated cells … Show more

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Cited by 177 publications
(231 citation statements)
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“…We previously found that Bpifb1 and Muc5b gene expression was strongly correlated in mouse lung tissue 10 , and here we have shown that BPIFB1 and MUC5B protein are colocalized in airway epithelial cells and present in secreted mucus. Cellular co-expression between BPIFB1 and MUC5B mRNA has also been demonstrated in human airways by single cell RNA sequencing studies 30,31 and between BPIFB1 and MUC5AC protein in COPD 32 . Lastly, our finding that BPIFB1 is present in mucin secretory granules, which are tightly packed and only contain the necessary proteins for mucus, implicates an additional regulatory mechanism coupling these two proteins.…”
Section: Resultsmentioning
confidence: 90%
“…We previously found that Bpifb1 and Muc5b gene expression was strongly correlated in mouse lung tissue 10 , and here we have shown that BPIFB1 and MUC5B protein are colocalized in airway epithelial cells and present in secreted mucus. Cellular co-expression between BPIFB1 and MUC5B mRNA has also been demonstrated in human airways by single cell RNA sequencing studies 30,31 and between BPIFB1 and MUC5AC protein in COPD 32 . Lastly, our finding that BPIFB1 is present in mucin secretory granules, which are tightly packed and only contain the necessary proteins for mucus, implicates an additional regulatory mechanism coupling these two proteins.…”
Section: Resultsmentioning
confidence: 90%
“…Secretory club cells (expressing CCSP , SCGB1A1 , and SCGB3A2 ) serve a protective role by both metabolizing inhaled toxins using cytochrome P450 in their smooth endoplasmic reticulum and through secretion of glycosaminoglycans, uteroglobin, and a surfactant-like substance ( 90 , 93 ). Tuft cells, originally described in the intestine as chemosensory cells that facilitate Th2 inflammation through their production of IL-25 and thymic stromal lymphopoietin (TSLP), have recently been identified as a rare airway EC type (identified by expression of POU2F3 ) ( 94 ). The role of pulmonary neuroendocrine cells (PNECs), present in bronchial airway epithelium (identified by expression of SYP , CHGA , PGP9.5 , ROBO2 , and ENO2 ), and their secretion of bioactive amines and peptides, remains poorly understood ( 95 ).…”
Section: Alveolar and Airway Ec Smentioning
confidence: 99%
“…Expression of these genes and their associated programs in the nasal airway epithelium is of particular interest given that the nasal epithelium is the primary site of infection for upper airway respiratory viruses, including coronaviruses, and acts as the gateway through which upper airway infections can spread into the lung. The airway epithelium is composed of multiple resident cell types (e.g., mucus secretory, ciliated, basal stem cells and rare epithelial cell types) interdigitated with immune cells (e.g., T cells, mast cells, macrophages), and the relative abundance of these cell types in the epithelium can greatly influence the expression of particular genes 9 11 , including ACE2 and TMPRSS2 . Furthermore, since the airway epithelium acts as a sentinel for the entire respiratory system, its cellular composition, along with its transcriptional and functional characteristics, are significantly shaped by interaction with environmental stimuli.…”
Section: Introductionmentioning
confidence: 99%