2015
DOI: 10.1038/ncomms6882
|View full text |Cite
|
Sign up to set email alerts
|

Direct links between the vernalization response and other key traits of cereal crops

Abstract: Transcription of the VERNALIZATION1 gene (VRN1) is induced by prolonged cold (vernalization) to trigger flowering of cereal crops, such as wheat and barley. VRN1 encodes a MADS box transcription factor that promotes flowering by regulating the expression of other genes. Here we use transcriptome sequencing (RNA-seq) and chromatin immunoprecipitation sequencing (ChIP-seq) to identify direct targets of VRN1. Over 500 genomic regions were identified as potential VRN1-binding targets by ChIP-seq. VRN1 binds the pr… Show more

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...
2
1
1

Citation Types

5
157
1

Year Published

2016
2016
2022
2022

Publication Types

Select...
3
3
2

Relationship

0
8

Authors

Journals

citations
Cited by 177 publications
(163 citation statements)
references
References 54 publications
5
157
1
Order By: Relevance
“…S4). Recently, VRN1 has been shown to directly bind to the OS2 promoter in barley (Deng et al, 2015), and OS2 expression is reduced in barley lines with highly expressed VRN1; however, vrn1 mutants in barley do not effect OS2 expression before vernalization (Greenup et al, 2010). In contrast with barley, OS2 levels are elevated in B. distachyon with reduced VRN1 mRNA levels but do not change relative to the wild type when VRN1 is up-regulated in amiVRN2 lines (Fig.…”
Section: Reduction Of Bdvrn1 Expression Results In Delayed Floweringmentioning
confidence: 73%
See 1 more Smart Citation
“…S4). Recently, VRN1 has been shown to directly bind to the OS2 promoter in barley (Deng et al, 2015), and OS2 expression is reduced in barley lines with highly expressed VRN1; however, vrn1 mutants in barley do not effect OS2 expression before vernalization (Greenup et al, 2010). In contrast with barley, OS2 levels are elevated in B. distachyon with reduced VRN1 mRNA levels but do not change relative to the wild type when VRN1 is up-regulated in amiVRN2 lines (Fig.…”
Section: Reduction Of Bdvrn1 Expression Results In Delayed Floweringmentioning
confidence: 73%
“…VRN1 levels increase during cold and remain elevated following cold (Trevaskis et al, 2003;Yan et al, 2003;Sasani et al, 2009), and this correlates with the stable reduction of VRN2 during and after cold exposure (Yan et al, 2004). Recently, it was shown that VRN1 binds to the VRN2 promoter and thus directly regulates VRN2 expression (Deng et al, 2015). Furthermore, mutations in the wheat VRN1 locus result in elevated VRN2 expression and delayed flowering (Chen and Dubcovsky, 2012).…”
mentioning
confidence: 99%
“…From these studies, however, it is not entirely clear whether it is VRN1 itself, or very closely linked genes, that is responsible. However, using a transgenic approach combined with chromatin immunoprecipitation sequencing and RNA sequencing, Deng et al [119] showed that in barley grown at 16 h photoperiod, VRN1 binds to the promoter of several CBF genes. After short-term cold exposure, when the expression level of VRN1 is still very low, Oliver et al [120] found similar kinetics in the initial transcription of VRN1 and COR14B upon cold exposure (24 h) in barley.…”
Section: Regulation Of Leaf Growth Versus Freezing Resistance In Springmentioning
confidence: 99%
“…The conducted analysis of of literature in recent years demonstrates the significance achievements of problems in the study of adaptability and adaptation of plant populations (Suley, 1989;Kyyak, 2014;Moskalets et al, 2016c) and prompts it to further development of analytical approaches, including the comparison of of vital functions occurring between different organisms in biocenosis not only of rare, relict and endemic plants, but also cultural species (Moskalets, Rybalchenko, 2015). The sharp aggravation of environmental situation as a result of anthropogenic impact induces to search for new forms of crops and the ways of realization their sustainability (Jones et al, 2012;Deng et al, 2015;Moskalets et al, 2016b). To resist extremal conditions can genotypes highly plastic, tread properties are determined by genetic, morphological, physiological and biochemical and biocoenotical mechanisms (Shpylchyn et al, 2010;Moskalets et al, 2016a).…”
Section: Introductionmentioning
confidence: 99%
“…Learning new plant forms of T. аestivum, T. trispecies, S. cereale in new growth conditions for them, allows to identify the number of promising biotypes, an important advantage which are the most complete implementation of the above conditions biopotential (Deng et al, 2015), with the highest possible manifestations of ecological tolerance to adverse abiotic and biotic factors, including exciters epiphytoties (Hof et al, 2011). Species-consort are migrating geographically constant modification (Minden et al, 2012).…”
Section: Introductionmentioning
confidence: 99%