2019
DOI: 10.1177/1040638719871089
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Direct culture–independent sequence typing of Taylorella equigenitalis obtained from genital swabs and frozen semen samples from South African horses

Abstract: We report herein the use of crude extracts obtained from samples of Taylorella equigenitalis–infected horses for the purpose of multi-locus sequence typing (MLST). Samples ( n = 36) were collected from horses in South Africa from 1996 to 2017: 34 from genital swabs (stored at −20°C for 2–3 y) and 2 from cryopreserved raw semen aliquots (stored at −70°C for 18 y) prior to assay. The MLST assay showed a single sequence type (ST), designated ST4, that supported a point introduction and thus a common source for th… Show more

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Cited by 4 publications
(3 citation statements)
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“…Furthermore, the use of swabs in Amies medium with charcoal could explain why it was only possible to carry out characterization in 11 out of the 39 real-time PCR samples considering possible inhibition caused by agar (Gibb and Wong, 1998). Therefore, the procedure carried out in this study could be an option for samples yielding a negative result by culture but a positive result by real-time PCR, but also for clinical samples avoiding a prior culture step, as already carried out by other authors with T. equigenitalis (May et al, 2019).…”
Section: Discussionmentioning
confidence: 74%
“…Furthermore, the use of swabs in Amies medium with charcoal could explain why it was only possible to carry out characterization in 11 out of the 39 real-time PCR samples considering possible inhibition caused by agar (Gibb and Wong, 1998). Therefore, the procedure carried out in this study could be an option for samples yielding a negative result by culture but a positive result by real-time PCR, but also for clinical samples avoiding a prior culture step, as already carried out by other authors with T. equigenitalis (May et al, 2019).…”
Section: Discussionmentioning
confidence: 74%
“…1 . If an isolate were required for archiving or bacteriological typing, a horse diagnosed as positive for T. equigenitalis by PCR could be re-sampled using transport medium and culture performed at this stage, although typing by multilocus sequence typing (MLST) has been successfully used on qPCR products obtained directly from swabs without the need for a culture isolate [ 6 ].…”
Section: Discussionmentioning
confidence: 99%
“…The DNA was extracted from the swabs and qPCR conducted as previously described 18. Positive samples were subjected to multilocus sequence typing (MLST) analysis as previously described 21…”
Section: Investigationsmentioning
confidence: 99%